Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 AC015688.6-201ENST00000577737 104 ntBASIC1.63□□□□□ -2.15
CLSTN3Q9BQT9 MIR4724-201ENST00000579485 89 ntBASIC1.63□□□□□ -2.15
CLSTN3Q9BQT9 MIR3128-201ENST00000581957 66 ntBASIC1.63□□□□□ -2.15
CLSTN3Q9BQT9 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
CLSTN3Q9BQT9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-833P-201ENST00000363486 107 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.416-201ENST00000384014 113 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.447-201ENST00000384184 113 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 U8.16-201ENST00000391279 133 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 MLLT10P1-201ENST00000418346 262 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 CALM2P4-201ENST00000430810 426 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 HMGN2P32-201ENST00000444648 269 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 AC120024.3-201ENST00000603167 156 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 AC095038.3-201ENST00000634439 195 ntBASIC1.62□□□□□ -2.15
CLSTN3Q9BQT9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-969P-201ENST00000383900 105 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.401-201ENST00000383965 117 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-211P-201ENST00000384047 107 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 MIR526A2-201ENST00000390198 65 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 MIR1276-201ENST00000408707 83 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 AL008718.3-201ENST00000610217 321 ntBASIC1.61□□□□□ -2.15
CLSTN3Q9BQT9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 AC068700.1-201ENST00000565862 3754 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-199P-201ENST00000362954 107 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 SNORD27-201ENST00000363981 72 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 SNORA12.1-201ENST00000390873 148 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 SNORD2.1-201ENST00000458762 69 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-322P-201ENST00000516010 103 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 SUMO2P16-201ENST00000519475 264 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 AP000942.4-201ENST00000604811 241 ntBASIC1.6□□□□□ -2.15
CLSTN3Q9BQT9 ZNF209P-201ENST00000593450 2304 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 MIRLET7C-201ENST00000362160 84 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 SNORA8.3-201ENST00000384679 139 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 MIR802-201ENST00000390235 94 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 SNX2P2-201ENST00000424553 323 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 MIR4282-201ENST00000583613 67 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 AC006006.1-201ENST00000603082 144 ntBASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
CLSTN3Q9BQT9 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 SNORA7.1-201ENST00000363750 139 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 SNORD14E-201ENST00000364009 85 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 MIR452-201ENST00000385020 85 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 SNORD45.4-201ENST00000516629 73 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-126P-201ENST00000516685 103 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 RPL23AP91-201ENST00000569211 455 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 SNORA4-201ENST00000584302 138 ntBASIC1.58□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 SNORA20.1-201ENST00000364790 130 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 SNORA2.2-201ENST00000365473 135 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 SNORD58.1-201ENST00000391313 66 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 AC114811.1-201ENST00000507207 168 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-1271P-201ENST00000517049 105 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 MIR4778-201ENST00000577635 80 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 AL513534.2-201ENST00000603836 250 ntBASIC1.57□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-42P-201ENST00000384165 107 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 MIR15B-201ENST00000385045 98 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 MT-TG-201ENST00000387429 68 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-111P-201ENST00000517179 105 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
CLSTN3Q9BQT9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms