Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-1205P-201ENST00000363625 106 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
RAB40CQ96S21 SNORD11-201ENST00000459124 84 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 RNU6-1143P-201ENST00000516125 104 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 RNU6-1007P-201ENST00000516586 107 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 PRELID3BP2-201ENST00000605362 201 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 AL359821.1-201ENST00000605519 182 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 AL353770.2-201ENST00000620024 78 ntBASIC0.93□□□□□ -2.26
RAB40CQ96S21 Y_RNA.26-201ENST00000362539 101 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 Y_RNA.153-201ENST00000363615 91 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 RNU6-326P-201ENST00000365480 107 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 RNU6-144P-201ENST00000383951 107 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 MTCYBP6-201ENST00000441810 138 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
RAB40CQ96S21 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.92□□□□□ -2.26
RAB40CQ96S21 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.92□□□□□ -2.26
RAB40CQ96S21 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 TRMT112P2-201ENST00000512910 132 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 RNU6-1137P-201ENST00000517073 99 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 AP003733.2-201ENST00000529409 171 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 AC044792.1-201ENST00000593294 196 ntBASIC0.92□□□□□ -2.26
RAB40CQ96S21 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RAB40CQ96S21 MIR103A2-201ENST00000362154 78 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 RNU6-1272P-201ENST00000362776 107 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 Y_RNA.64-201ENST00000362845 102 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 RNA5SP48-201ENST00000363969 126 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 SNORA33.2-201ENST00000365413 134 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 RNU6-639P-201ENST00000384074 107 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 SNORD72-201ENST00000390994 80 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.91□□□□□ -2.26
RAB40CQ96S21 BTF3P11-201ENST00000426582 477 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 SNRPGP14-201ENST00000435400 219 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 RNU7-21P-201ENST00000459430 62 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC091959.1-201ENST00000495857 238 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC136443.5-201ENST00000603741 370 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 AC013791.1-201ENST00000616619 62 ntBASIC0.91□□□□□ -2.26
RAB40CQ96S21 Y_RNA.11-201ENST00000362375 109 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 SNORA25.3-201ENST00000363205 127 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 RNU6-268P-201ENST00000364174 107 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 Y_RNA.242-201ENST00000364473 110 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 SNORD114-24-201ENST00000365029 72 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 Y_RNA.327-201ENST00000365201 102 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 RNU6-985P-201ENST00000410182 104 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 Y_RNA.637-201ENST00000459424 114 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 Y_RNA.676-201ENST00000516393 96 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 RNU6-1153P-201ENST00000516760 105 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.9□□□□□ -2.27
RAB40CQ96S21 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
RAB40CQ96S21 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RAB40CQ96S21 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RAB40CQ96S21 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 RNU6-662P-201ENST00000384253 104 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AL603910.2-201ENST00000407268 136 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AC005534.2-201ENST00000431047 433 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AL731563.1-201ENST00000442202 214 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.89□□□□□ -2.27
RAB40CQ96S21 AC023449.1-201ENST00000454464 154 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 MIR5692C2-201ENST00000577959 77 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.89□□□□□ -2.27
RAB40CQ96S21 Pinc.1-201ENST00000616452 154 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AC015726.2-201ENST00000620112 122 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
RAB40CQ96S21 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.89□□□□□ -2.27
RAB40CQ96S21 MIR367-201ENST00000362299 68 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 Y_RNA.14-201ENST00000362415 103 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 Y_RNA.16-201ENST00000362421 102 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 Y_RNA.84-201ENST00000363011 104 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 Y_RNA.330-201ENST00000365230 109 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 RNU6-1227P-201ENST00000383981 107 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 SNORD28B-201ENST00000390993 75 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 RNU6-383P-201ENST00000410864 94 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 RNU6-321P-201ENST00000410912 106 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 MTND5P22-201ENST00000458380 195 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.88□□□□□ -2.27
RAB40CQ96S21 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.88□□□□□ -2.27
RAB40CQ96S21 RN7SKP164-201ENST00000516138 266 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 RNU6-830P-201ENST00000516353 107 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 AP003716.2-201ENST00000528260 108 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.88□□□□□ -2.27
RAB40CQ96S21 MIR548AR-201ENST00000582191 57 ntBASIC0.88□□□□□ -2.27
RAB40CQ96S21 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
RAB40CQ96S21 Y_RNA.164-201ENST00000363709 102 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 Y_RNA.293-201ENST00000364908 93 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms