Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIR548AE1-201ENST00000583292 70 ntBASIC-1.52□□□□□ -2.65
CSMD1Q96PZ7 AC108081.1-201ENST00000604358 221 ntBASIC-1.52□□□□□ -2.65
CSMD1Q96PZ7 AC096586.1-201ENST00000610267 561 ntBASIC-1.52□□□□□ -2.65
CSMD1Q96PZ7 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.52□□□□□ -2.65
CSMD1Q96PZ7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 RNY4P10-201ENST00000365571 96 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 SNORD12C-201ENST00000386307 89 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AL137161.1-201ENST00000532231 390 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 SNORD38C-201ENST00000384381 69 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 MIR525-201ENST00000384978 85 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 RNU6-847P-201ENST00000411115 108 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AC055872.1-201ENST00000570978 278 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 MTND3P13-201ENST00000574391 343 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AC087683.1-201ENST00000591187 441 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AC104073.3-201ENST00000610942 955 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 RNU6-324P-201ENST00000363957 106 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 MTATP6P18-201ENST00000417994 673 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AC236972.2-201ENST00000434979 310 ntBASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.53□□□□□ -2.65
CSMD1Q96PZ7 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC010975.2-201ENST00000427781 588 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU6-90P-201ENST00000606352 106 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC004386.2-201ENST00000441858 148 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 snoU13.8-201ENST00000458890 104 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU6-437P-201ENST00000459408 95 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU6-341P-201ENST00000516973 96 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 MTND5P40-201ENST00000559945 246 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 MIR4460-201ENST00000577862 86 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC026585.1-201ENST00000619582 524 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC005345.1-201ENST00000431868 217 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 AC010486.2-201ENST00000505572 483 ntBASIC-1.54□□□□□ -2.66
CSMD1Q96PZ7 RNU6-924P-201ENST00000362926 108 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 SNRPGP14-201ENST00000435400 219 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC091178.2-201ENST00000584401 117 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC069503.3-201ENST00000618674 145 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 SNORA72.3-201ENST00000365074 132 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC026410.2-201ENST00000460281 156 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 AC080013.3-201ENST00000606839 578 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 MTND1P7-201ENST00000632801 297 ntBASIC-1.55□□□□□ -2.66
CSMD1Q96PZ7 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 AP001282.2-201ENST00000616149 309 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 FTX_4.1-201ENST00000616291 147 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 RPL30P10-201ENST00000488148 337 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 AC087883.1-201ENST00000551882 391 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 AC091948.2-201ENST00000636510 279 ntBASIC-1.56□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 RNU6-395P-201ENST00000365662 106 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 RPL23AP30-201ENST00000432419 501 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 FGF7P4-201ENST00000509595 295 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 RNU7-172P-201ENST00000517125 64 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 MIR626-201ENST00000385032 94 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 MIR599-201ENST00000385069 95 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 SNORD65.1-201ENST00000390889 71 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 MTCO1P57-201ENST00000432182 261 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 RNU6-221P-201ENST00000459541 99 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 AL359881.1-201ENST00000602916 267 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 AC079248.2-201ENST00000623779 326 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.57□□□□□ -2.66
CSMD1Q96PZ7 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 PMCHL1-202ENST00000423102 261 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AC093423.1-201ENST00000440817 142 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 VN1R10P-201ENST00000447106 875 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RPL39P36-201ENST00000490784 156 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AC008628.2-201ENST00000502605 298 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RNU6-344P-201ENST00000516635 111 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RNA5SP454-201ENST00000517231 127 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AC005771.1-201ENST00000585581 349 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AL020997.3-201ENST00000602843 359 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AL450270.1-201ENST00000606160 391 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AC012467.1-201ENST00000607740 256 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RNU6-695P-201ENST00000391157 104 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 MTCO3P19-201ENST00000415864 321 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 AC108059.2-201ENST00000434626 151 ntBASIC-1.58□□□□□ -2.66
CSMD1Q96PZ7 RPL22P17-201ENST00000438729 315 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms