Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.341-201ENST00000365341 102 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 RNU6-310P-201ENST00000384655 107 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 MIR520H-201ENST00000385126 88 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 RNU7-115P-201ENST00000516433 55 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 MIR4514-201ENST00000581410 57 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 AC098679.4-201ENST00000624241 654 ntBASIC0.23□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.166-201ENST00000363730 102 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.318-201ENST00000365131 97 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 RNU6-934P-201ENST00000365154 107 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 RNU6-125P-201ENST00000384505 107 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 RNU6-264P-201ENST00000517134 104 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 MIR3612-201ENST00000579753 87 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 MIR4804-201ENST00000581683 73 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 LARP7P1-201ENST00000605576 316 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 U6.92-201ENST00000636464 89 ntBASIC0.22□□□□□ -2.37
ECHDC3Q96DC8 MIR330-201ENST00000362196 94 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.27-201ENST00000362540 103 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 SNORD81.1-201ENST00000363064 77 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 RNY3P11-201ENST00000364153 102 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 U8.7-201ENST00000364940 136 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 RNU6-1175P-201ENST00000365200 107 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 MIR520F-201ENST00000384824 87 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 AL590004.1-201ENST00000405321 300 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 AL603910.2-201ENST00000407268 136 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 AC005042.3-201ENST00000453230 174 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 RNU7-56P-201ENST00000458744 62 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 RNU6-470P-201ENST00000515954 104 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 RNU7-181P-201ENST00000517234 74 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 MIR4264-201ENST00000583520 66 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 JPX_2.1-201ENST00000614161 69 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 U2.1-201ENST00000618978 145 ntBASIC0.21□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.6-201ENST00000362350 114 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 SNORA1.2-201ENST00000365189 134 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 RNU6-890P-201ENST00000384121 107 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 RNU6-708P-201ENST00000384217 107 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 SNORD83.1-201ENST00000411362 77 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 MTND4P17-201ENST00000470444 350 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 RNU6-977P-201ENST00000516411 103 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 uc_338.4-201ENST00000616635 176 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 AC010205.1-201ENST00000616668 449 ntBASIC0.2□□□□□ -2.38
ECHDC3Q96DC8 RNU6-845P-201ENST00000362578 103 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RNU6-674P-201ENST00000363831 107 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.279-201ENST00000364763 95 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 SNORA24-201ENST00000384096 131 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RNU6-205P-201ENST00000390858 107 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 SNORD72-201ENST00000390994 80 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RNU6-847P-201ENST00000411115 108 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 AL358176.2-201ENST00000425769 204 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.635-201ENST00000459041 101 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RNU7-169P-201ENST00000459456 61 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 AP000753.3-201ENST00000604083 169 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 AL162730.1-201ENST00000605734 292 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 AC020891.4-201ENST00000605745 93 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 AC022306.2-201ENST00000617563 647 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 MIR548AY-201ENST00000617669 107 ntBASIC0.19□□□□□ -2.38
ECHDC3Q96DC8 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 RNU4-50P-201ENST00000364361 141 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 RNU6-370P-201ENST00000411008 104 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 PDCL2P1-201ENST00000419302 352 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 BTF3P11-201ENST00000426582 477 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 MIR2681-201ENST00000581814 105 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 MIR4676-201ENST00000583078 72 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 RNA5SP325-201ENST00000363756 130 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.462-201ENST00000384268 102 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 SNORD100-201ENST00000408573 76 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.605-201ENST00000410577 105 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 AC090844.1-201ENST00000422019 156 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 FGF7P6-202ENST00000451282 293 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 SNORD11-201ENST00000459124 84 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 AC091959.1-201ENST00000495857 238 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 SCARNA8-201ENST00000515924 131 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 RNA5SP330-201ENST00000517096 96 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 MIR4771-2-201ENST00000577758 74 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 MIR4771-1-201ENST00000582617 74 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 MIR5690-201ENST00000583739 73 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 DEFB117-201ENST00000602356 141 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
ECHDC3Q96DC8 MIR518A1-201ENST00000385068 85 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 MIR559-201ENST00000385188 96 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AC015818.7-201ENST00000428754 109 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms