Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.35□□□□□ -2.19
SMARCE1Q969G3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.35□□□□□ -2.19
SMARCE1Q969G3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.35□□□□□ -2.19
SMARCE1Q969G3 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
SMARCE1Q969G3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SMARCE1Q969G3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 RNU6-740P-201ENST00000364734 105 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 RNU6-211P-201ENST00000384047 107 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 MIR1302-6-201ENST00000408466 90 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 AC087685.1-201ENST00000587507 141 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 AL021707.8-201ENST00000609428 183 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 U2.14-201ENST00000615943 113 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.34□□□□□ -2.19
SMARCE1Q969G3 AC099654.10-201ENST00000640395 161 ntBASIC1.34□□□□□ -2.19
SMARCE1Q969G3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
SMARCE1Q969G3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
SMARCE1Q969G3 AL442644.1-201ENST00000454390 3105 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 MIR136-201ENST00000385207 82 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 RNU4-62P-201ENST00000410125 130 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCE1Q969G3 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 SNORD111.1-201ENST00000516421 86 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 AL357312.1-201ENST00000603879 298 ntBASIC1.33□□□□□ -2.2
SMARCE1Q969G3 MIR335-201ENST00000362173 94 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 RNU6-442P-201ENST00000383968 104 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 MIR1285-1-201ENST00000408593 84 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AC245047.8-201ENST00000456455 284 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 snoU13.25-201ENST00000458945 104 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
SMARCE1Q969G3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCE1Q969G3 MIR367-201ENST00000362299 68 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.133-201ENST00000363428 110 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 RNU6-268P-201ENST00000364174 107 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 MIR568-201ENST00000385036 95 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
SMARCE1Q969G3 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.31□□□□□ -2.2
SMARCE1Q969G3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.31□□□□□ -2.2
SMARCE1Q969G3 MIR4724-201ENST00000579485 89 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 MIR3192-201ENST00000584920 77 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 AL049861.1-201ENST00000603130 150 ntBASIC1.31□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 MIR802-201ENST00000390235 94 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 MIR526A2-201ENST00000390198 65 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 AC108667.1-201ENST00000428618 249 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 MTCYBP9-201ENST00000431021 303 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.29□□□□□ -2.2
SMARCE1Q969G3 SNORD2.1-201ENST00000458762 69 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 MTCO2P24-201ENST00000515611 426 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 AC012433.1-201ENST00000588916 398 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 uc_338.4-201ENST00000616635 176 ntBASIC1.29□□□□□ -2.2
SMARCE1Q969G3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 RNA5SP496-201ENST00000391240 109 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 RNU2-38P-201ENST00000410856 79 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 RNU7-41P-201ENST00000515917 61 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 RNU7-149P-201ENST00000516739 59 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 MIR4643-201ENST00000577473 78 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 AL022345.2-201ENST00000606307 135 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 U6.104-201ENST00000637979 90 ntBASIC1.28□□□□□ -2.2
SMARCE1Q969G3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
SMARCE1Q969G3 MIR378A-201ENST00000362177 66 ntBASIC1.27□□□□□ -2.21
SMARCE1Q969G3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms