Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6-1007P-201ENST00000516586 107 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 Y_RNA.713-201ENST00000517013 96 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 DEFB108E-201ENST00000524692 240 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.45□□□□□ -2.34
UFD1Q92890 AC133485.1-201ENST00000567176 124 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 AC138907.6-201ENST00000568401 126 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 AC006441.5-201ENST00000612680 209 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 MTND1P7-201ENST00000632801 297 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 MIR96-201ENST00000362288 78 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 RNA5SP432-201ENST00000362480 116 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 Y_RNA.143-201ENST00000363520 106 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 Y_RNA.242-201ENST00000364473 110 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 Y_RNA.383-201ENST00000383855 97 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 SNORA72.4-201ENST00000384174 132 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 U8.20-201ENST00000459445 131 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 AC010655.3-201ENST00000478818 450 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 SCARNA8-201ENST00000515924 131 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 AC005357.1-201ENST00000588399 301 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 SNORD58B-201ENST00000607313 66 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
UFD1Q92890 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.44□□□□□ -2.34
UFD1Q92890 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
UFD1Q92890 MIR377-201ENST00000362145 69 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 RNU4-80P-201ENST00000363200 141 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 Y_RNA.164-201ENST00000363709 102 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 RNU6-801P-201ENST00000364087 105 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 RNU4-50P-201ENST00000364361 141 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 RNY3-201ENST00000365484 102 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 Y_RNA.376-201ENST00000365638 108 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 Y_RNA.526-201ENST00000384572 110 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 MT-TN-201ENST00000387400 73 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 POLR2KP2-201ENST00000438155 177 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
UFD1Q92890 FGF7P4-201ENST00000509595 295 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 RNU2-13P-201ENST00000515909 113 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
UFD1Q92890 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.43□□□□□ -2.34
UFD1Q92890 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
UFD1Q92890 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.43□□□□□ -2.34
UFD1Q92890 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
UFD1Q92890 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
UFD1Q92890 Y_RNA.5-201ENST00000362334 102 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-369P-201ENST00000362515 102 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 Y_RNA.80-201ENST00000362996 102 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-580P-201ENST00000365159 107 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-1283P-201ENST00000365314 105 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 Y_RNA.485-201ENST00000384395 102 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-847P-201ENST00000411115 108 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 RNU6-976P-201ENST00000516086 111 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
UFD1Q92890 SNORA72.1-201ENST00000363485 129 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 Y_RNA.471-201ENST00000384312 102 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 RNU6-1248P-201ENST00000391096 64 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 SNORA26.5-201ENST00000391215 123 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.41□□□□□ -2.34
UFD1Q92890 snoU13.21-201ENST00000459368 105 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 SEPT14P8-201ENST00000508026 178 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.41□□□□□ -2.34
UFD1Q92890 AP000753.3-201ENST00000604083 169 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 SNORD113-5-201ENST00000607261 78 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 RMST_2.1-201ENST00000617263 136 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 MIR6767-201ENST00000637302 66 ntBASIC0.41□□□□□ -2.34
UFD1Q92890 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
UFD1Q92890 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
UFD1Q92890 Y_RNA.191-201ENST00000363972 113 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 Y_RNA.286-201ENST00000364813 102 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 SNORD114-22-201ENST00000365423 72 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 CYP3A137P-201ENST00000562436 69 ntBASIC0.4□□□□□ -2.35
UFD1Q92890 Y_RNA.813-201ENST00000364639 102 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 RNU6-125P-201ENST00000384505 107 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 RNU6-205P-201ENST00000390858 107 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 RNU6-130P-201ENST00000411112 103 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 AC236972.2-201ENST00000434979 310 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 AC040926.1-201ENST00000530195 238 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 PART1_1.1-201ENST00000611761 217 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 uc_338.4-201ENST00000616635 176 ntBASIC0.39□□□□□ -2.35
UFD1Q92890 RNU6-899P-201ENST00000363947 107 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 RNU1-93P-201ENST00000364704 169 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 SNORA25.9-201ENST00000365087 128 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 RNU6-934P-201ENST00000365154 107 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 RNY1P14-201ENST00000384426 108 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 Y_RNA.529-201ENST00000384586 119 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 RNU6-191P-201ENST00000516295 94 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms