Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
CCHCR1Q8TD31 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCHCR1Q8TD31 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.11□□□□□ -2.07
CCHCR1Q8TD31 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 snoU13.27-201ENST00000459278 104 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 Y_RNA.703-201ENST00000516846 111 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 MIR378D2-201ENST00000580636 98 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 MTND1P7-201ENST00000632801 297 ntBASIC2.1□□□□□ -2.07
CCHCR1Q8TD31 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 RNU6-978P-201ENST00000364371 103 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 SNORD116-18-201ENST00000383961 92 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 RNU2-70P-201ENST00000410718 179 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 RPL30P13-201ENST00000418873 348 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 MIR3133-201ENST00000583157 78 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 DNAJC19P2-201ENST00000593340 302 ntBASIC2.09□□□□□ -2.07
CCHCR1Q8TD31 Y_RNA.66-201ENST00000362862 102 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.91-201ENST00000363042 107 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 snoU2-30.1-201ENST00000365012 70 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 RNU6-424P-201ENST00000384367 105 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 RNU6-360P-201ENST00000390944 104 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 AC027279.3-201ENST00000625055 122 ntBASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCHCR1Q8TD31 RNU6-774P-201ENST00000363238 107 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 RNU6-597P-201ENST00000365620 102 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 SNRPGP14-201ENST00000435400 219 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 AL392103.1-201ENST00000447000 198 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 AC099513.1-201ENST00000490423 301 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 CYCTP-201ENST00000504253 315 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 SNORD45.4-201ENST00000516629 73 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 RNU6-365P-201ENST00000517113 106 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 MIR4709-201ENST00000577272 72 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 MIR3646-201ENST00000578301 84 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 AC120024.3-201ENST00000603167 156 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 AC021506.2-201ENST00000612354 169 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.778-201ENST00000620203 90 ntBASIC2.07□□□□□ -2.08
CCHCR1Q8TD31 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 AL442644.1-201ENST00000454390 3105 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 RNU6-1084P-201ENST00000362498 107 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.393-201ENST00000383936 102 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.400-201ENST00000383963 111 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 RNU6-768P-201ENST00000384683 107 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 CALM2P4-201ENST00000430810 426 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 SNORD116-25-201ENST00000516517 92 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 RNA5SP168-201ENST00000516642 112 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 AC006441.5-201ENST00000612680 209 ntBASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCHCR1Q8TD31 SNORD24-201ENST00000383884 75 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 RNU6-442P-201ENST00000383968 104 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AC114811.1-201ENST00000507207 168 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 RNU6-504P-201ENST00000516568 104 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 MIR3122-201ENST00000577243 73 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AL773524.1-201ENST00000614065 229 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 MIR3658-201ENST00000636291 56 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
CCHCR1Q8TD31 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-888P-201ENST00000363010 101 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-833P-201ENST00000363486 107 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-151P-201ENST00000364158 107 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-818P-201ENST00000364837 108 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.521-201ENST00000384560 114 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU7-34P-201ENST00000459394 64 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RN7SL429P-201ENST00000479090 223 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RN7SL489P-201ENST00000486185 223 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RN7SL327P-201ENST00000488659 223 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-346P-201ENST00000516288 111 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-1116P-201ENST00000517269 99 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RN7SL853P-201ENST00000617250 223 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 AL513423.1-201ENST00000621695 132 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
CCHCR1Q8TD31 RNU6-268P-201ENST00000364174 107 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 Y_RNA.215-201ENST00000364204 112 ntBASIC2.03□□□□□ -2.08
CCHCR1Q8TD31 RNU6-187P-201ENST00000384139 106 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms