Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RPS3AP1-201ENST00000413190 320 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 RNU6-437P-201ENST00000459408 95 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 AC010655.3-201ENST00000478818 450 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 NDUFA4P2-201ENST00000489989 244 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 RNU6-830P-201ENST00000516353 107 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 MIR5000-201ENST00000577717 103 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 AC007485.1-201ENST00000616755 206 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 MIR6515-201ENST00000619843 57 ntBASIC0.85□□□□□ -2.27
CCDC83Q8IWF9 RNY1-201ENST00000364228 113 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 SNORA63.7-201ENST00000365579 123 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 SNORA72.4-201ENST00000384174 132 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 SNRPGP14-201ENST00000435400 219 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 RNU7-141P-201ENST00000459304 62 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 RNU6-197P-201ENST00000516680 100 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 AC008133.2-201ENST00000624540 351 ntBASIC0.84□□□□□ -2.27
CCDC83Q8IWF9 AC134026.1-201ENST00000623249 2239 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 RNU4-80P-201ENST00000363200 141 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.222-201ENST00000364264 102 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.242-201ENST00000364473 110 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.286-201ENST00000364813 102 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.431-201ENST00000384086 102 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 MIR802-201ENST00000390235 94 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 SNORA36B-201ENST00000410438 131 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 RNU6-1007P-201ENST00000516586 107 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 AC008507.4-201ENST00000585464 127 ntBASIC0.83□□□□□ -2.28
CCDC83Q8IWF9 RNU6-801P-201ENST00000364087 105 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.370-201ENST00000365589 108 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.424-201ENST00000384063 103 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 MTND4P19-201ENST00000446659 478 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 AL392103.1-201ENST00000447000 198 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.639-201ENST00000458981 102 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 AC109810.1-201ENST00000534066 224 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 MIR548AR-201ENST00000582191 57 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 Pinc.1-201ENST00000616452 154 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 MIR4251-201ENST00000635819 61 ntBASIC0.82□□□□□ -2.28
CCDC83Q8IWF9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.148-201ENST00000363557 117 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 RNU6-268P-201ENST00000364174 107 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 SNORD42.2-201ENST00000365570 69 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 RNU2-14P-201ENST00000411053 191 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 AC022028.1-201ENST00000412054 408 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 AC005357.1-201ENST00000588399 301 ntBASIC0.81□□□□□ -2.28
CCDC83Q8IWF9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 RNU6-1048P-201ENST00000364054 107 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 MIR613-201ENST00000385248 95 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 RNU6-191P-201ENST00000516295 94 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC133485.1-201ENST00000567176 124 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 RPL23AP91-201ENST00000569211 455 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC023827.1-201ENST00000569247 97 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC104695.3-201ENST00000604052 296 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 AC090971.5-201ENST00000621102 293 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
CCDC83Q8IWF9 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 SNORD113-8-201ENST00000363497 74 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.183-201ENST00000363882 113 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.445-201ENST00000384168 102 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 RNU6-1067P-201ENST00000384752 107 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 SNORD28B-201ENST00000390993 75 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 SNORA26.5-201ENST00000391215 123 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 MIR1302-7-201ENST00000408841 72 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 AC006461.1-201ENST00000412637 326 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 SNORD11-201ENST00000459124 84 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 U7.7-201ENST00000459276 60 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 RNU6-1046P-201ENST00000516538 107 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 MIR4300-201ENST00000581016 96 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 MIR376A1-201ENST00000616574 68 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 AC090574.1-201ENST00000623186 233 ntBASIC0.79□□□□□ -2.28
CCDC83Q8IWF9 RNU6-899P-201ENST00000363947 107 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 MIR598-201ENST00000384868 97 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 U8.17-201ENST00000391292 132 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 SNORD111-201ENST00000408139 94 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 Y_RNA.715-201ENST00000517082 110 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 AC036111.3-201ENST00000526389 112 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 AC124312.5-201ENST00000604451 268 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
CCDC83Q8IWF9 MIR369-201ENST00000362155 70 ntBASIC0.77□□□□□ -2.29
CCDC83Q8IWF9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms