Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SNORD115-34-201ENST00000362441 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-12-201ENST00000362583 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-29-201ENST00000362834 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-9-201ENST00000362912 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-21-201ENST00000362963 81 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 Y_RNA.78-201ENST00000362970 110 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-14-201ENST00000363090 81 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-13-201ENST00000363358 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-833P-201ENST00000363486 107 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-41-201ENST00000363608 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-11-201ENST00000363616 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-5-201ENST00000363633 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-39-201ENST00000363694 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-414P-201ENST00000363705 104 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-4-201ENST00000363810 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-16-201ENST00000363887 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-6-201ENST00000363942 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-42-201ENST00000364273 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-15-201ENST00000364809 81 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-1-201ENST00000364961 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-26-201ENST00000365067 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-10-201ENST00000365073 81 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-43-201ENST00000365503 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-36-201ENST00000365629 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 MIR1302-4-201ENST00000408701 150 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 RNU7-96P-201ENST00000459535 64 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-40-201ENST00000606510 82 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBE3DQ7Z6J8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 SNORA63.5-201ENST00000363548 123 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 Y_RNA.348-201ENST00000365403 103 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 RNA5SP465-201ENST00000391195 109 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 RPL23AP83-201ENST00000434984 473 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 SUMO2P16-201ENST00000519475 264 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 MIR5009-201ENST00000578736 100 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 AP001318.4-201ENST00000616637 121 ntBASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UBE3DQ7Z6J8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 SNORA63D-201ENST00000364359 132 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 SNORA27-201ENST00000384323 126 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 MIR548D2-201ENST00000384955 97 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 RNU7-123P-201ENST00000515911 60 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-158P-201ENST00000517104 100 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 Y_RNA.818-201ENST00000618813 71 ntBASIC2.61□□□□□ -1.99
UBE3DQ7Z6J8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 AL596211.1-201ENST00000569873 2277 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-905P-201ENST00000384434 107 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-998P-201ENST00000515894 101 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 SNORA40.13-201ENST00000516379 120 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-56P-201ENST00000516986 93 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 IGLV3-17-201ENST00000519099 244 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 AC068339.1-201ENST00000526965 141 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBE3DQ7Z6J8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 U8.6-201ENST00000364939 135 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 SNORA1.2-201ENST00000365189 134 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 AC015922.2-201ENST00000435593 184 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 RNU6-893P-201ENST00000458841 100 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 SNORA31.10-201ENST00000516482 106 ntBASIC2.59□□□□□ -1.99
UBE3DQ7Z6J8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -2
UBE3DQ7Z6J8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
UBE3DQ7Z6J8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -2
UBE3DQ7Z6J8 Y_RNA.241-201ENST00000364470 117 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 MIR483-201ENST00000385070 76 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 MIR1912-201ENST00000410389 80 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 AC006023.1-201ENST00000603944 259 ntBASIC2.58□□□□□ -2
UBE3DQ7Z6J8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
UBE3DQ7Z6J8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.57□□□□□ -2
UBE3DQ7Z6J8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBE3DQ7Z6J8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBE3DQ7Z6J8 RNU6-640P-201ENST00000363693 105 ntBASIC2.57□□□□□ -2
UBE3DQ7Z6J8 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
UBE3DQ7Z6J8 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
UBE3DQ7Z6J8 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
UBE3DQ7Z6J8 SNORA70.7-201ENST00000384159 133 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms