Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 MIR3128-201ENST00000581957 66 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-199P-201ENST00000362954 107 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-131P-201ENST00000391144 107 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 MIR891A-201ENST00000401237 79 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 SNRPGP14-201ENST00000435400 219 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 AL603825.1-201ENST00000438481 80 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 HMGN2P32-201ENST00000444648 269 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
SYNE3Q6ZMZ3 MIR367-201ENST00000362299 68 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD50B-201ENST00000364995 70 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 SNORA8.3-201ENST00000384679 139 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 AC114811.1-201ENST00000507207 168 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 RNA5SP445-201ENST00000515889 115 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD116-28-201ENST00000516123 91 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SYNE3Q6ZMZ3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 RNY4P28-201ENST00000365281 93 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-383P-201ENST00000410864 94 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 RNU7-12P-201ENST00000516030 62 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 RNU4-71P-201ENST00000516258 113 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD45.4-201ENST00000516629 73 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 AL365265.1-201ENST00000621045 234 ntBASIC1.63□□□□□ -2.15
SYNE3Q6ZMZ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 MIR4778-201ENST00000577635 80 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.62□□□□□ -2.15
SYNE3Q6ZMZ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD27-201ENST00000363981 72 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-163P-201ENST00000384396 106 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 PIGPP3-201ENST00000425307 415 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 AC245047.8-201ENST00000456455 284 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 AC079140.2-201ENST00000506193 142 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 AL391903.3-201ENST00000612158 163 ntBASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 SNORA2.2-201ENST00000365473 135 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 MIR452-201ENST00000385020 85 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-381P-201ENST00000391259 108 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RPS27P16-201ENST00000425758 201 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD77.4-201ENST00000516158 81 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-111P-201ENST00000517179 105 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RNU6-902P-201ENST00000517212 91 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 AC090049.2-201ENST00000550377 109 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 AC006006.1-201ENST00000603082 144 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 AL365434.2-201ENST00000607979 234 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 uc_338.4-201ENST00000616635 176 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
SYNE3Q6ZMZ3 RNU4-10P-201ENST00000364383 140 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 SNORA20.1-201ENST00000364790 130 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 RNU4-17P-201ENST00000365598 141 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 RNY3P5-201ENST00000384127 102 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 SNORD41-201ENST00000386967 70 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms