Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 AC104985.2-201ENST00000620598 500 ntBASIC0.83□□□□□ -2.28
LRIT3Q3SXY7 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
LRIT3Q3SXY7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 MTND1P14-201ENST00000427400 950 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 RPL23AP54-201ENST00000495129 419 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 AC093027.1-201ENST00000546698 429 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 MIR4764-201ENST00000580680 88 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 MIR4801-201ENST00000582704 82 ntBASIC0.82□□□□□ -2.28
LRIT3Q3SXY7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 RNA5SP48-201ENST00000363969 126 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 RNU4-50P-201ENST00000364361 141 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.551-201ENST00000384661 102 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AL590004.1-201ENST00000405321 300 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AC024405.2-202ENST00000532731 184 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AC087685.1-201ENST00000587507 141 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AC096720.1-201ENST00000604441 183 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 AP003357.1-201ENST00000604497 148 ntBASIC0.81□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.5-201ENST00000362334 102 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 SNORD63-201ENST00000384262 68 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 SNORD38C-201ENST00000384381 69 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 RNU6-1248P-201ENST00000391096 64 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 snoU13.25-201ENST00000458945 104 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 SNORD123-201ENST00000459473 70 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 HMGN1P10-201ENST00000474557 553 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 RNU6-507P-201ENST00000516045 100 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 AC006157.1-201ENST00000611750 366 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 AC112487.2-201ENST00000637950 304 ntBASIC0.8□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.58-201ENST00000362807 102 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 SNORD81.1-201ENST00000363064 77 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.154-201ENST00000363624 102 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNY3P1-201ENST00000365085 102 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNY3-201ENST00000365484 102 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU6-937P-201ENST00000384325 106 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU4-30P-201ENST00000410245 143 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 AC006461.1-201ENST00000412637 326 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU7-115P-201ENST00000516433 55 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 AC127455.1-201ENST00000565496 145 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 MIR2681-201ENST00000581814 105 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 AL080274.1-201ENST00000605565 220 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 SNORD58B-201ENST00000607313 66 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 MIR548AY-201ENST00000617669 107 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 SEPT14P17-201ENST00000617978 177 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
LRIT3Q3SXY7 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 SNORA25.3-201ENST00000363205 127 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.143-201ENST00000363520 106 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 U8.7-201ENST00000364940 136 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 RNU6-442P-201ENST00000383968 104 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 MT-TD-201ENST00000387419 68 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AF228730.4-201ENST00000421457 183 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 POLR2KP2-201ENST00000438155 177 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 MTND3P22-201ENST00000510932 243 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AC040926.1-201ENST00000530195 238 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 MIR3145-201ENST00000580727 82 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
LRIT3Q3SXY7 Y_RNA.80-201ENST00000362996 102 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.197-201ENST00000364004 102 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.315-201ENST00000365117 102 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.485-201ENST00000384395 102 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 SEPT14P8-201ENST00000508026 178 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 RNU6-475P-201ENST00000516073 104 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 SNORD113-5-201ENST00000607261 78 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.804-201ENST00000615262 101 ntBASIC0.77□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.383-201ENST00000383855 97 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.424-201ENST00000384063 103 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.579-201ENST00000390939 94 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 RNU6-1170P-201ENST00000515974 106 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 AP003716.2-201ENST00000528260 108 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 MIR4795-201ENST00000584182 89 ntBASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.76□□□□□ -2.29
LRIT3Q3SXY7 RNU4-73P-201ENST00000363164 141 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.148-201ENST00000363557 117 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 RNU6-1209P-201ENST00000363655 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms