Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 MIR1278-201ENST00000408753 81 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 Y_RNA.590-201ENST00000410140 107 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 AC004965.1-201ENST00000413033 213 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 RPL23AP94-201ENST00000512518 302 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 AC100767.1-201ENST00000528178 123 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 MIR2681-201ENST00000581814 105 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 AL512598.1-201ENST00000610158 273 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CKAP4Q07065 RNU6-653P-201ENST00000363074 106 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 RNU6-1209P-201ENST00000363655 107 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 Y_RNA.188-201ENST00000363952 111 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 SNORD27-201ENST00000363981 72 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 Y_RNA.269-201ENST00000364685 89 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 SNORA20.1-201ENST00000364790 130 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 Y_RNA.292-201ENST00000364904 97 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 SNORD1A-201ENST00000364968 72 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 RNY4P28-201ENST00000365281 93 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 MIR626-201ENST00000385032 94 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 U8.16-201ENST00000391279 133 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.05□□□□□ -2.24
CKAP4Q07065 Y_RNA.621-201ENST00000411065 96 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 CALM2P4-201ENST00000430810 426 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 PGBD4P5-201ENST00000445958 426 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 SNORD11-201ENST00000459124 84 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.05□□□□□ -2.24
CKAP4Q07065 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 RNU4-71P-201ENST00000516258 113 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 RNA5SP168-201ENST00000516642 112 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 RNU6-111P-201ENST00000517179 105 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 AC015688.6-201ENST00000577737 104 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 Y_RNA.802-201ENST00000614892 130 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 AL365265.1-201ENST00000621045 234 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 MIR8063-201ENST00000621930 81 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 AC027279.3-201ENST00000625055 122 ntBASIC1.05□□□□□ -2.24
CKAP4Q07065 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CKAP4Q07065 AL442644.1-201ENST00000454390 3105 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 RNU6-379P-201ENST00000363813 104 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 Y_RNA.489-201ENST00000384410 101 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 MIR660-201ENST00000385235 97 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 RNA5SP496-201ENST00000391240 109 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 RNU6-383P-201ENST00000410864 94 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.04□□□□□ -2.24
CKAP4Q07065 SNRPGP10-201ENST00000432323 225 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 NDUFA4P2-201ENST00000489989 244 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 Y_RNA.679-201ENST00000516416 91 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 RNU6-1271P-201ENST00000517049 105 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 MIR4724-201ENST00000579485 89 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 AC006006.1-201ENST00000603082 144 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 ICE2P2-201ENST00000483823 2787 ntBASIC1.04□□□□□ -2.24
CKAP4Q07065 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CKAP4Q07065 SNORD68-201ENST00000363214 84 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 RNU6-833P-201ENST00000363486 107 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 RNU6-457P-201ENST00000363999 107 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 RNU4-10P-201ENST00000364383 140 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 Y_RNA.293-201ENST00000364908 93 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 SNORA8.3-201ENST00000384679 139 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.03□□□□□ -2.24
CKAP4Q07065 AC009474.2-201ENST00000451383 136 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 CYCTP-201ENST00000504253 315 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 AC087685.1-201ENST00000587507 141 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 AC009779.6-201ENST00000603972 165 ntBASIC1.03□□□□□ -2.24
CKAP4Q07065 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
CKAP4Q07065 MIR367-201ENST00000362299 68 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 Y_RNA.65-201ENST00000362846 100 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 SNORA7.1-201ENST00000363750 139 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 SNORD50B-201ENST00000364995 70 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CKAP4Q07065 RNU6-131P-201ENST00000391144 107 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.02□□□□□ -2.25
CKAP4Q07065 RPL23AP91-201ENST00000569211 455 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 AC120024.3-201ENST00000603167 156 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 JPX_2.1-201ENST00000614161 69 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 AC141273.2-201ENST00000618989 130 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 SNORD3E-202ENST00000627253 216 ntBASIC1.02□□□□□ -2.25
CKAP4Q07065 snoU2_19.4-201ENST00000364329 80 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.229-201ENST00000364347 113 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.262-201ENST00000364641 102 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.476-201ENST00000384347 108 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.572-201ENST00000384757 98 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 RNU6-381P-201ENST00000391259 108 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.626-201ENST00000411288 95 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 AL133373.1-201ENST00000497098 94 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.01□□□□□ -2.25
CKAP4Q07065 AC079140.2-201ENST00000506193 142 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 SNORD45.4-201ENST00000516629 73 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 Y_RNA.714-201ENST00000517065 90 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 RNU6-1116P-201ENST00000517269 99 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.01□□□□□ -2.25
CKAP4Q07065 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.01□□□□□ -2.25
CKAP4Q07065 MIR3945-201ENST00000581853 98 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 AC008507.4-201ENST00000585464 127 ntBASIC1.01□□□□□ -2.25
CKAP4Q07065 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
CKAP4Q07065 Y_RNA.24-201ENST00000362508 103 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms