Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 Y_RNA.176-201ENST00000363815 109 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 Y_RNA.237-201ENST00000364439 102 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 Y_RNA.293-201ENST00000364908 93 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 MIR136-201ENST00000385207 82 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 MIR1302-6-201ENST00000408466 90 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 RNU6-383P-201ENST00000410864 94 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.24□□□□□ -2.21
CDK3Q00526 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
CDK3Q00526 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 MIR6078-201ENST00000611069 100 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 MIR8062-201ENST00000621515 85 ntBASIC1.24□□□□□ -2.21
CDK3Q00526 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDK3Q00526 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CDK3Q00526 UBE2WP1-201ENST00000362030 340 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 Y_RNA.164-201ENST00000363709 102 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 Y_RNA.461-201ENST00000384263 103 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 AL117187.1-201ENST00000555482 181 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 AC136443.5-201ENST00000603741 370 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 AL360085.1-201ENST00000604713 532 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 AL008718.3-201ENST00000610217 321 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 U6.104-201ENST00000637979 90 ntBASIC1.23□□□□□ -2.21
CDK3Q00526 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CDK3Q00526 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDK3Q00526 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 MIR367-201ENST00000362299 68 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 Y_RNA.44-201ENST00000362676 108 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 RNU6-442P-201ENST00000383968 104 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 Y_RNA.483-201ENST00000384380 101 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 RNU6-1289P-201ENST00000384431 106 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 RNU6-1007P-201ENST00000516586 107 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 MIR4724-201ENST00000579485 89 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 AC008507.4-201ENST00000585464 127 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 AC068700.1-201ENST00000565862 3754 ntBASIC1.22□□□□□ -2.21
CDK3Q00526 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 Y_RNA.275-201ENST00000364726 110 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 MT-TW-201ENST00000387382 68 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 AC023449.1-201ENST00000454464 154 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 Y_RNA.676-201ENST00000516393 96 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 SNORA18.7-201ENST00000516910 131 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
CDK3Q00526 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.21□□□□□ -2.22
CDK3Q00526 Y_RNA.117-201ENST00000363294 101 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 RNU6-211P-201ENST00000384047 107 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 SNORD38C-201ENST00000384381 69 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 MIR15B-201ENST00000385045 98 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 SNORD72-201ENST00000390994 80 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
CDK3Q00526 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 SNORA31.2-201ENST00000516019 134 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 RNU6-327P-201ENST00000516270 127 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.2□□□□□ -2.22
CDK3Q00526 MIR4719-201ENST00000585233 84 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 AL096861.1-201ENST00000610899 123 ntBASIC1.2□□□□□ -2.22
CDK3Q00526 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
CDK3Q00526 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
CDK3Q00526 MIR335-201ENST00000362173 94 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 Y_RNA.47-201ENST00000362697 108 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 RNU6-1309P-201ENST00000363305 108 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 Y_RNA.149-201ENST00000363558 117 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 RNU6-740P-201ENST00000364734 105 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 MTND2P23-201ENST00000422990 651 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 SCARNA15.1-201ENST00000516384 125 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.19□□□□□ -2.22
CDK3Q00526 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.19□□□□□ -2.22
CDK3Q00526 U2.14-201ENST00000615943 113 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
CDK3Q00526 Y_RNA.162-201ENST00000363683 102 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 RNU6-268P-201ENST00000364174 107 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 RNU4-10P-201ENST00000364383 140 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 RNU6-472P-201ENST00000384299 107 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 AL358176.2-201ENST00000425769 204 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 AC006006.1-201ENST00000603082 144 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 AL049861.1-201ENST00000603130 150 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CDK3Q00526 Y_RNA.802-201ENST00000614892 130 ntBASIC1.18□□□□□ -2.22
CDK3Q00526 Y_RNA.242-201ENST00000364473 110 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 Y_RNA.396-201ENST00000383949 103 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 MIR520C-201ENST00000385005 87 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 RNA5SP496-201ENST00000391240 109 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 AL078595.1-201ENST00000404458 226 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 AL603910.2-201ENST00000407268 136 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 SNRPGP14-201ENST00000435400 219 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 SNORA70.22-201ENST00000517160 124 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms