Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC068700.1-201ENST00000565862 3754 ntBASIC0.69□□□□□ -2.3
SRP54P61011 Y_RNA.148-201ENST00000363557 117 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-674P-201ENST00000363831 107 ntBASIC0.68□□□□□ -2.3
SRP54P61011 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
SRP54P61011 Y_RNA.263-201ENST00000364659 114 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
SRP54P61011 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
SRP54P61011 SNORD28B-201ENST00000390993 75 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-1248P-201ENST00000391096 64 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-994P-201ENST00000410507 111 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-1132P-201ENST00000459214 107 ntBASIC0.68□□□□□ -2.3
SRP54P61011 RNU6-437P-201ENST00000459408 95 ntBASIC0.68□□□□□ -2.3
SRP54P61011 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
SRP54P61011 AC008507.4-201ENST00000585464 127 ntBASIC0.68□□□□□ -2.3
SRP54P61011 PVT1_3.1-201ENST00000620853 95 ntBASIC0.68□□□□□ -2.3
SRP54P61011 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
SRP54P61011 Y_RNA.5-201ENST00000362334 102 ntBASIC0.67□□□□□ -2.3
SRP54P61011 Y_RNA.112-201ENST00000363250 102 ntBASIC0.67□□□□□ -2.3
SRP54P61011 RNU4-50P-201ENST00000364361 141 ntBASIC0.67□□□□□ -2.3
SRP54P61011 RNU6-1009P-201ENST00000390996 107 ntBASIC0.67□□□□□ -2.3
SRP54P61011 RNU6-613P-201ENST00000410412 108 ntBASIC0.67□□□□□ -2.3
SRP54P61011 AC098869.1-201ENST00000481627 292 ntBASIC0.67□□□□□ -2.3
SRP54P61011 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.67□□□□□ -2.3
SRP54P61011 RNU6-875P-201ENST00000516488 106 ntBASIC0.67□□□□□ -2.3
SRP54P61011 MIR2115-201ENST00000516657 100 ntBASIC0.67□□□□□ -2.3
SRP54P61011 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
SRP54P61011 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
SRP54P61011 MIR3145-201ENST00000580727 82 ntBASIC0.67□□□□□ -2.3
SRP54P61011 SNORD58B-201ENST00000607313 66 ntBASIC0.67□□□□□ -2.3
SRP54P61011 RNU6-94P-201ENST00000607728 107 ntBASIC0.67□□□□□ -2.3
SRP54P61011 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.67□□□□□ -2.3
SRP54P61011 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
SRP54P61011 RNU6-268P-201ENST00000364174 107 ntBASIC0.66□□□□□ -2.3
SRP54P61011 RNY3-201ENST00000365484 102 ntBASIC0.66□□□□□ -2.3
SRP54P61011 RNU6-937P-201ENST00000384325 106 ntBASIC0.66□□□□□ -2.3
SRP54P61011 RNU4-30P-201ENST00000410245 143 ntBASIC0.66□□□□□ -2.3
SRP54P61011 MTND1P14-201ENST00000427400 950 ntBASIC0.66□□□□□ -2.3
SRP54P61011 AC005534.2-201ENST00000431047 433 ntBASIC0.66□□□□□ -2.3
SRP54P61011 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
SRP54P61011 RNU6-475P-201ENST00000516073 104 ntBASIC0.66□□□□□ -2.3
SRP54P61011 AC104695.3-201ENST00000604052 296 ntBASIC0.66□□□□□ -2.3
SRP54P61011 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.66□□□□□ -2.3
SRP54P61011 7SK.10-201ENST00000621414 298 ntBASIC0.66□□□□□ -2.3
SRP54P61011 Y_RNA.383-201ENST00000383855 97 ntBASIC0.65□□□□□ -2.31
SRP54P61011 SNORA72.4-201ENST00000384174 132 ntBASIC0.65□□□□□ -2.31
SRP54P61011 MIR613-201ENST00000385248 95 ntBASIC0.65□□□□□ -2.31
SRP54P61011 U8.17-201ENST00000391292 132 ntBASIC0.65□□□□□ -2.31
SRP54P61011 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
SRP54P61011 SNORA36B-201ENST00000410438 131 ntBASIC0.65□□□□□ -2.31
SRP54P61011 POLR2KP2-201ENST00000438155 177 ntBASIC0.65□□□□□ -2.31
SRP54P61011 RNU7-141P-201ENST00000459304 62 ntBASIC0.65□□□□□ -2.31
SRP54P61011 SEPT14P8-201ENST00000508026 178 ntBASIC0.65□□□□□ -2.31
SRP54P61011 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.65□□□□□ -2.31
SRP54P61011 SNORD113-5-201ENST00000607261 78 ntBASIC0.65□□□□□ -2.31
SRP54P61011 Y_RNA.143-201ENST00000363520 106 ntBASIC0.64□□□□□ -2.31
SRP54P61011 RNU6-654P-201ENST00000364373 107 ntBASIC0.64□□□□□ -2.31
SRP54P61011 Y_RNA.303-201ENST00000364998 94 ntBASIC0.64□□□□□ -2.31
SRP54P61011 SNORA1.2-201ENST00000365189 134 ntBASIC0.64□□□□□ -2.31
SRP54P61011 Y_RNA.471-201ENST00000384312 102 ntBASIC0.64□□□□□ -2.31
SRP54P61011 Y_RNA.529-201ENST00000384586 119 ntBASIC0.64□□□□□ -2.31
SRP54P61011 Y_RNA.537-201ENST00000384626 109 ntBASIC0.64□□□□□ -2.31
SRP54P61011 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.64□□□□□ -2.31
SRP54P61011 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
SRP54P61011 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.64□□□□□ -2.31
SRP54P61011 AC006441.5-201ENST00000612680 209 ntBASIC0.64□□□□□ -2.31
SRP54P61011 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.64□□□□□ -2.31
SRP54P61011 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SRP54P61011 SNORA51.10-201ENST00000384418 136 ntBASIC0.63□□□□□ -2.31
SRP54P61011 RNU6-342P-201ENST00000384521 104 ntBASIC0.63□□□□□ -2.31
SRP54P61011 MTCO2P33-201ENST00000402100 465 ntBASIC0.63□□□□□ -2.31
SRP54P61011 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
SRP54P61011 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
SRP54P61011 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.63□□□□□ -2.31
SRP54P61011 AC040926.1-201ENST00000530195 238 ntBASIC0.63□□□□□ -2.31
SRP54P61011 RPL23AP91-201ENST00000569211 455 ntBASIC0.63□□□□□ -2.31
SRP54P61011 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
SRP54P61011 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
SRP54P61011 RNU4-80P-201ENST00000363200 141 ntBASIC0.62□□□□□ -2.31
SRP54P61011 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
SRP54P61011 RNU6-396P-201ENST00000365369 105 ntBASIC0.62□□□□□ -2.31
SRP54P61011 Y_RNA.356-201ENST00000365475 113 ntBASIC0.62□□□□□ -2.31
SRP54P61011 SNORA2B-201ENST00000384583 137 ntBASIC0.62□□□□□ -2.31
SRP54P61011 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.62□□□□□ -2.31
SRP54P61011 SNORD11-201ENST00000459124 84 ntBASIC0.62□□□□□ -2.31
SRP54P61011 SCARNA8-201ENST00000515924 131 ntBASIC0.62□□□□□ -2.31
SRP54P61011 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.62□□□□□ -2.31
SRP54P61011 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SRP54P61011 RNU6-801P-201ENST00000364087 105 ntBASIC0.61□□□□□ -2.31
SRP54P61011 Y_RNA.315-201ENST00000365117 102 ntBASIC0.61□□□□□ -2.31
SRP54P61011 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
SRP54P61011 AL603910.2-201ENST00000407268 136 ntBASIC0.61□□□□□ -2.31
SRP54P61011 MTND5P20-201ENST00000448677 143 ntBASIC0.61□□□□□ -2.31
SRP54P61011 AC010655.3-201ENST00000478818 450 ntBASIC0.61□□□□□ -2.31
SRP54P61011 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SRP54P61011 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.61□□□□□ -2.31
SRP54P61011 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
SRP54P61011 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SRP54P61011 MIR377-201ENST00000362145 69 ntBASIC0.6□□□□□ -2.31
SRP54P61011 Y_RNA.80-201ENST00000362996 102 ntBASIC0.6□□□□□ -2.31
SRP54P61011 Y_RNA.197-201ENST00000364004 102 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms