Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SNORA69.1-201ENST00000390904 137 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 MIR1265-201ENST00000408444 86 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.06□□□□□ -2.4
CLDN6P56747 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.06□□□□□ -2.4
CLDN6P56747 RNU7-116P-201ENST00000516940 62 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 AC060780.3-201ENST00000589464 80 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 RNU6-268P-201ENST00000364174 107 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 RNU6-1323P-201ENST00000384025 107 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 Y_RNA.450-201ENST00000384198 113 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 Y_RNA.549-201ENST00000384657 102 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 Y_RNA.554-201ENST00000384672 102 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 SNRPGP14-201ENST00000435400 219 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 AC107399.1-201ENST00000451226 265 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 RPL30P15-201ENST00000457129 321 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 RNU7-56P-201ENST00000458744 62 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 POLR3GP1-201ENST00000594073 261 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 AC020891.4-201ENST00000605745 93 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 SNORA25.18-201ENST00000607153 114 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 uc_338.4-201ENST00000616635 176 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 uc_338.16-201ENST00000621804 95 ntBASIC0.05□□□□□ -2.4
CLDN6P56747 RNU6-626P-201ENST00000363354 107 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 Y_RNA.146-201ENST00000363549 102 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 Y_RNA.592-201ENST00000410274 109 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 RNU6-710P-201ENST00000410424 105 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.04□□□□□ -2.4
CLDN6P56747 AC073261.1-201ENST00000429409 121 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.04□□□□□ -2.4
CLDN6P56747 RNU6-966P-201ENST00000516479 104 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 RNA5SP94-201ENST00000516917 108 ntBASIC0.04□□□□□ -2.4
CLDN6P56747 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 Y_RNA.329-201ENST00000365209 107 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 Y_RNA.482-201ENST00000384377 111 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 RNU6-510P-201ENST00000391239 108 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 MIR938-201ENST00000401216 83 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 RNU6-847P-201ENST00000411115 108 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 AL022718.1-201ENST00000412004 84 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 RNU7-62P-201ENST00000458856 62 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 RNU6-470P-201ENST00000515954 104 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 AC024909.2-201ENST00000553035 286 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 AC087588.2-201ENST00000617667 426 ntBASIC0.03□□□□□ -2.4
CLDN6P56747 Y_RNA.72-201ENST00000362894 103 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 RNU6-1209P-201ENST00000363655 107 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 Y_RNA.194-201ENST00000363985 102 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 Y_RNA.341-201ENST00000365341 102 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 SNORD78.2-201ENST00000391076 69 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 MCFD2P1-201ENST00000417812 300 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 RPL23AP54-201ENST00000495129 419 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 PRDX4P1-201ENST00000507189 574 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 AC090517.2-201ENST00000614966 680 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
CLDN6P56747 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 RNU4-75P-201ENST00000364621 146 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 SNORA75.4-201ENST00000391278 119 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 SNORD100-201ENST00000408573 76 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 RPS29P25-201ENST00000481709 171 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 SNORA18.4-201ENST00000516440 124 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 AC069113.3-201ENST00000521019 150 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 AC024405.2-202ENST00000532731 184 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.01□□□□□ -2.41
CLDN6P56747 AC008507.4-201ENST00000585464 127 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 AP003357.1-201ENST00000604497 148 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.01□□□□□ -2.41
CLDN6P56747 AC011476.5-201ENST00000615594 130 ntBASIC0.01□□□□□ -2.41
CLDN6P56747 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
CLDN6P56747 SNORD118-201ENST00000363593 134 ntBASIC0□□□□□ -2.41
CLDN6P56747 Y_RNA.390-201ENST00000383932 102 ntBASIC0□□□□□ -2.41
CLDN6P56747 SNORA8.2-201ENST00000384372 139 ntBASIC0□□□□□ -2.41
CLDN6P56747 RNY3P4-201ENST00000384428 101 ntBASIC0□□□□□ -2.41
CLDN6P56747 BTF3P11-201ENST00000426582 477 ntBASIC0□□□□□ -2.41
CLDN6P56747 MTND1P2-201ENST00000430604 821 ntBASIC0□□□□□ -2.41
CLDN6P56747 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0□□□□□ -2.41
CLDN6P56747 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0□□□□□ -2.41
CLDN6P56747 MIR5188-201ENST00000583467 113 ntBASIC0□□□□□ -2.41
CLDN6P56747 AC078938.1-201ENST00000620993 318 ntBASIC0□□□□□ -2.41
CLDN6P56747 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 SNORD116-2-201ENST00000384274 95 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 RNU6-364P-201ENST00000384387 107 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 SNORD116-6-201ENST00000384711 96 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 RNU2-13P-201ENST00000515909 113 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 AC127455.1-201ENST00000565496 145 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 AC090897.1-201ENST00000580909 226 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 AC022441.3-201ENST00000605737 136 ntBASIC-0.01□□□□□ -2.41
CLDN6P56747 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.01□□□□□ -2.41
CLDN6P56747 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 SNORA63C-201ENST00000364578 129 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 SNORA2A-201ENST00000383885 135 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 SNORD72-201ENST00000390994 80 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 AL590004.1-201ENST00000405321 300 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms