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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
LINC02534-201
ENST00000446525
283 nt
TSL 3
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
AC023449.1-201
ENST00000454464
154 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
RPS23P4-201
ENST00000487908
423 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
RNU6-1338P-201
ENST00000516328
91 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
AC113192.4-201
ENST00000534666
547 nt
TSL 4
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
MIR5688-201
ENST00000580619
83 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
PRELID3BP2-201
ENST00000605362
201 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
AL391903.3-201
ENST00000612158
163 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
KCNQ1OT1_5.1-201
ENST00000621902
226 nt
BASIC
1.14
□□□□□ -2.23
CDH13
P55290
Y_RNA.16-201
ENST00000362421
102 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
SNORA63-201
ENST00000363450
132 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
RNU6-1160P-201
ENST00000384546
104 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
MIR520C-201
ENST00000385005
87 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
AC245047.8-201
ENST00000456455
284 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
SNORD123-201
ENST00000459473
70 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
SNORD79.1-201
ENST00000516069
84 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
SNORA18.7-201
ENST00000516910
131 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
RNA5SP404-201
ENST00000517118
132 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
EBAG9-207
ENST00000531677
777 nt
TSL 1 (best)
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
snoU13.31-201
ENST00000607291
104 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
AC135050.6-201
ENST00000610813
528 nt
TSL 3
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
AC006441.5-201
ENST00000612680
209 nt
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
LINC01359-207
ENST00000634799
487 nt
TSL 5
BASIC
1.13
□□□□□ -2.23
CDH13
P55290
RNU6-268P-201
ENST00000364174
107 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
RNU6-662P-201
ENST00000384253
104 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
SNORA80D-201
ENST00000384488
135 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
RNU6-713P-201
ENST00000384761
107 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
MIR19B1-201
ENST00000384829
87 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
RNU6ATAC15P-201
ENST00000408279
121 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
RNU6ATAC8P-201
ENST00000408460
126 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
MIR1285-1-201
ENST00000408593
84 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
AL591704.2-201
ENST00000421658
181 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
BTF3P11-201
ENST00000426582
477 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.720-201
ENST00000517166
92 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
LINC02277-202
ENST00000556472
453 nt
TSL 3
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
MIR4724-201
ENST00000579485
89 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
MIR4764-201
ENST00000580680
88 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
MIR3192-201
ENST00000584920
77 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
AL021707.8-201
ENST00000609428
183 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.812-201
ENST00000610788
101 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.784-201
ENST00000613803
101 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.787-201
ENST00000616522
101 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.780-201
ENST00000617336
101 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.801-201
ENST00000619005
101 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
AC022140.2-201
ENST00000623500
188 nt
BASIC
1.12
□□□□□ -2.23
CDH13
P55290
Y_RNA.14-201
ENST00000362415
103 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
MIR222-201
ENST00000384992
110 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
MIR526A2-201
ENST00000390198
65 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
RPS29P28-201
ENST00000446439
141 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
RNU7-40P-201
ENST00000516397
64 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
AC084365.1-201
ENST00000552470
310 nt
TSL 3
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
AL157834.3-201
ENST00000615543
103 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
Pinc.1-201
ENST00000616452
154 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
AL353770.2-201
ENST00000620024
78 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
snoU18.1-201
ENST00000629629
71 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
U6.104-201
ENST00000637979
90 nt
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
DENND4A-209
ENST00000635620
5887 nt
TSL 5
BASIC
1.11
□□□□□ -2.23
CDH13
P55290
AL391987.6-201
ENST00000305671
199 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
MIR367-201
ENST00000362299
68 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
RNA5SP48-201
ENST00000363969
126 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
Y_RNA.363-201
ENST00000365529
113 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
RNU6-1011P-201
ENST00000384668
107 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AL603910.2-201
ENST00000407268
136 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AP000235.1-201
ENST00000424017
479 nt
TSL 3
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
MTND5P22-201
ENST00000458380
195 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
snoU13.25-201
ENST00000458945
104 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
TRBVB-201
ENST00000477100
408 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AC068658.1-201
ENST00000507509
388 nt
TSL 2
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AP003716.2-201
ENST00000528260
108 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AC136443.5-201
ENST00000603741
370 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
AL008718.3-201
ENST00000610217
321 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
uc_338.4-201
ENST00000616635
176 nt
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
SLC8A1-AS1-230
ENST00000627538
212 nt
TSL 5
BASIC
1.1
□□□□□ -2.23
CDH13
P55290
IL6ST-203
ENST00000381287
8667 nt
TSL 5
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
MIR335-201
ENST00000362173
94 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
Y_RNA.275-201
ENST00000364726
110 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
RNU6-1138P-201
ENST00000365359
106 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
SNORD72-201
ENST00000390994
80 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
AC063976.4-201
ENST00000421971
163 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
AL353614.1-201
ENST00000445631
206 nt
TSL 5
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
NMTRQ-TTG12-1-201
ENST00000467595
72 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
AC055733.2-201
ENST00000504737
340 nt
TSL 2
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
AC108729.3-201
ENST00000513484
108 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
RNU6-570P-201
ENST00000517051
105 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
DEFB108E-201
ENST00000524692
240 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
MIR4498-201
ENST00000577599
66 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
AP001282.2-201
ENST00000616149
309 nt
BASIC
1.09
□□□□□ -2.23
CDH13
P55290
RNA5SP264-201
ENST00000363115
107 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
Y_RNA.145-201
ENST00000363527
102 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
Y_RNA.293-201
ENST00000364908
93 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
Y_RNA.376-201
ENST00000365638
108 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
MIR606-201
ENST00000384851
96 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
RNU6-383P-201
ENST00000410864
94 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
Y_RNA.638-201
ENST00000459374
113 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
RNU7-21P-201
ENST00000459430
62 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
RPS26P48-201
ENST00000491713
339 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
RNU6-635P-201
ENST00000516651
102 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
SCARNA24.2-201
ENST00000516968
130 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
Y_RNA.802-201
ENST00000614892
130 nt
BASIC
1.08
□□□□□ -2.24
CDH13
P55290
AC068700.1-201
ENST00000565862
3754 nt
BASIC
1.07
□□□□□ -2.24
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