Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH13P55290 AC023449.1-201ENST00000454464 154 ntBASIC1.14□□□□□ -2.23
CDH13P55290 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
CDH13P55290 RNU6-1338P-201ENST00000516328 91 ntBASIC1.14□□□□□ -2.23
CDH13P55290 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.14□□□□□ -2.23
CDH13P55290 MIR5688-201ENST00000580619 83 ntBASIC1.14□□□□□ -2.23
CDH13P55290 PRELID3BP2-201ENST00000605362 201 ntBASIC1.14□□□□□ -2.23
CDH13P55290 AL391903.3-201ENST00000612158 163 ntBASIC1.14□□□□□ -2.23
CDH13P55290 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.14□□□□□ -2.23
CDH13P55290 Y_RNA.16-201ENST00000362421 102 ntBASIC1.13□□□□□ -2.23
CDH13P55290 SNORA63-201ENST00000363450 132 ntBASIC1.13□□□□□ -2.23
CDH13P55290 RNU6-1160P-201ENST00000384546 104 ntBASIC1.13□□□□□ -2.23
CDH13P55290 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
CDH13P55290 AC245047.8-201ENST00000456455 284 ntBASIC1.13□□□□□ -2.23
CDH13P55290 SNORD123-201ENST00000459473 70 ntBASIC1.13□□□□□ -2.23
CDH13P55290 SNORD79.1-201ENST00000516069 84 ntBASIC1.13□□□□□ -2.23
CDH13P55290 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
CDH13P55290 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CDH13P55290 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CDH13P55290 snoU13.31-201ENST00000607291 104 ntBASIC1.13□□□□□ -2.23
CDH13P55290 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.13□□□□□ -2.23
CDH13P55290 AC006441.5-201ENST00000612680 209 ntBASIC1.13□□□□□ -2.23
CDH13P55290 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
CDH13P55290 RNU6-268P-201ENST00000364174 107 ntBASIC1.12□□□□□ -2.23
CDH13P55290 RNU6-662P-201ENST00000384253 104 ntBASIC1.12□□□□□ -2.23
CDH13P55290 SNORA80D-201ENST00000384488 135 ntBASIC1.12□□□□□ -2.23
CDH13P55290 RNU6-713P-201ENST00000384761 107 ntBASIC1.12□□□□□ -2.23
CDH13P55290 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
CDH13P55290 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.12□□□□□ -2.23
CDH13P55290 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
CDH13P55290 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
CDH13P55290 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
CDH13P55290 BTF3P11-201ENST00000426582 477 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.720-201ENST00000517166 92 ntBASIC1.12□□□□□ -2.23
CDH13P55290 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH13P55290 MIR4724-201ENST00000579485 89 ntBASIC1.12□□□□□ -2.23
CDH13P55290 MIR4764-201ENST00000580680 88 ntBASIC1.12□□□□□ -2.23
CDH13P55290 MIR3192-201ENST00000584920 77 ntBASIC1.12□□□□□ -2.23
CDH13P55290 AL021707.8-201ENST00000609428 183 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.812-201ENST00000610788 101 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.784-201ENST00000613803 101 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.787-201ENST00000616522 101 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.780-201ENST00000617336 101 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.801-201ENST00000619005 101 ntBASIC1.12□□□□□ -2.23
CDH13P55290 AC022140.2-201ENST00000623500 188 ntBASIC1.12□□□□□ -2.23
CDH13P55290 Y_RNA.14-201ENST00000362415 103 ntBASIC1.11□□□□□ -2.23
CDH13P55290 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
CDH13P55290 MIR526A2-201ENST00000390198 65 ntBASIC1.11□□□□□ -2.23
CDH13P55290 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
CDH13P55290 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
CDH13P55290 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH13P55290 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
CDH13P55290 Pinc.1-201ENST00000616452 154 ntBASIC1.11□□□□□ -2.23
CDH13P55290 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
CDH13P55290 snoU18.1-201ENST00000629629 71 ntBASIC1.11□□□□□ -2.23
CDH13P55290 U6.104-201ENST00000637979 90 ntBASIC1.11□□□□□ -2.23
CDH13P55290 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH13P55290 AL391987.6-201ENST00000305671 199 ntBASIC1.1□□□□□ -2.23
CDH13P55290 MIR367-201ENST00000362299 68 ntBASIC1.1□□□□□ -2.23
CDH13P55290 RNA5SP48-201ENST00000363969 126 ntBASIC1.1□□□□□ -2.23
CDH13P55290 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
CDH13P55290 RNU6-1011P-201ENST00000384668 107 ntBASIC1.1□□□□□ -2.23
CDH13P55290 AL603910.2-201ENST00000407268 136 ntBASIC1.1□□□□□ -2.23
CDH13P55290 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH13P55290 MTND5P22-201ENST00000458380 195 ntBASIC1.1□□□□□ -2.23
CDH13P55290 snoU13.25-201ENST00000458945 104 ntBASIC1.1□□□□□ -2.23
CDH13P55290 TRBVB-201ENST00000477100 408 ntBASIC1.1□□□□□ -2.23
CDH13P55290 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH13P55290 AP003716.2-201ENST00000528260 108 ntBASIC1.1□□□□□ -2.23
CDH13P55290 AC136443.5-201ENST00000603741 370 ntBASIC1.1□□□□□ -2.23
CDH13P55290 AL008718.3-201ENST00000610217 321 ntBASIC1.1□□□□□ -2.23
CDH13P55290 uc_338.4-201ENST00000616635 176 ntBASIC1.1□□□□□ -2.23
CDH13P55290 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH13P55290 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH13P55290 MIR335-201ENST00000362173 94 ntBASIC1.09□□□□□ -2.23
CDH13P55290 Y_RNA.275-201ENST00000364726 110 ntBASIC1.09□□□□□ -2.23
CDH13P55290 RNU6-1138P-201ENST00000365359 106 ntBASIC1.09□□□□□ -2.23
CDH13P55290 SNORD72-201ENST00000390994 80 ntBASIC1.09□□□□□ -2.23
CDH13P55290 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
CDH13P55290 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH13P55290 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.09□□□□□ -2.23
CDH13P55290 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.09□□□□□ -2.23
CDH13P55290 AC108729.3-201ENST00000513484 108 ntBASIC1.09□□□□□ -2.23
CDH13P55290 RNU6-570P-201ENST00000517051 105 ntBASIC1.09□□□□□ -2.23
CDH13P55290 DEFB108E-201ENST00000524692 240 ntBASIC1.09□□□□□ -2.23
CDH13P55290 MIR4498-201ENST00000577599 66 ntBASIC1.09□□□□□ -2.23
CDH13P55290 AP001282.2-201ENST00000616149 309 ntBASIC1.09□□□□□ -2.23
CDH13P55290 RNA5SP264-201ENST00000363115 107 ntBASIC1.08□□□□□ -2.24
CDH13P55290 Y_RNA.145-201ENST00000363527 102 ntBASIC1.08□□□□□ -2.24
CDH13P55290 Y_RNA.293-201ENST00000364908 93 ntBASIC1.08□□□□□ -2.24
CDH13P55290 Y_RNA.376-201ENST00000365638 108 ntBASIC1.08□□□□□ -2.24
CDH13P55290 MIR606-201ENST00000384851 96 ntBASIC1.08□□□□□ -2.24
CDH13P55290 RNU6-383P-201ENST00000410864 94 ntBASIC1.08□□□□□ -2.24
CDH13P55290 Y_RNA.638-201ENST00000459374 113 ntBASIC1.08□□□□□ -2.24
CDH13P55290 RNU7-21P-201ENST00000459430 62 ntBASIC1.08□□□□□ -2.24
CDH13P55290 RPS26P48-201ENST00000491713 339 ntBASIC1.08□□□□□ -2.24
CDH13P55290 RNU6-635P-201ENST00000516651 102 ntBASIC1.08□□□□□ -2.24
CDH13P55290 SCARNA24.2-201ENST00000516968 130 ntBASIC1.08□□□□□ -2.24
CDH13P55290 Y_RNA.802-201ENST00000614892 130 ntBASIC1.08□□□□□ -2.24
CDH13P55290 AC068700.1-201ENST00000565862 3754 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms