Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 JPX_2.1-201ENST00000614161 69 ntBASIC0.27□□□□□ -2.37
ACLYP53396 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
ACLYP53396 RNY3P11-201ENST00000364153 102 ntBASIC0.26□□□□□ -2.37
ACLYP53396 Y_RNA.310-201ENST00000365063 113 ntBASIC0.26□□□□□ -2.37
ACLYP53396 Y_RNA.537-201ENST00000384626 109 ntBASIC0.26□□□□□ -2.37
ACLYP53396 MIR520F-201ENST00000384824 87 ntBASIC0.26□□□□□ -2.37
ACLYP53396 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.26□□□□□ -2.37
ACLYP53396 MTATP6P26-201ENST00000445926 662 ntBASIC0.26□□□□□ -2.37
ACLYP53396 snoU13.21-201ENST00000459368 105 ntBASIC0.26□□□□□ -2.37
ACLYP53396 RNU7-169P-201ENST00000459456 61 ntBASIC0.26□□□□□ -2.37
ACLYP53396 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.26□□□□□ -2.37
ACLYP53396 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
ACLYP53396 MIR18A-201ENST00000362310 71 ntBASIC0.25□□□□□ -2.37
ACLYP53396 SNORD45.3-201ENST00000363836 72 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU6-268P-201ENST00000364174 107 ntBASIC0.25□□□□□ -2.37
ACLYP53396 Y_RNA.341-201ENST00000365341 102 ntBASIC0.25□□□□□ -2.37
ACLYP53396 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
ACLYP53396 Y_RNA.646-201ENST00000410980 101 ntBASIC0.25□□□□□ -2.37
ACLYP53396 MTCO3P10-201ENST00000455912 772 ntBASIC0.25□□□□□ -2.37
ACLYP53396 NDUFA4P2-201ENST00000489989 244 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU6-470P-201ENST00000515954 104 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU6-977P-201ENST00000516411 103 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU6-358P-201ENST00000516564 75 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNA5SP285-201ENST00000516619 119 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU4-77P-201ENST00000516692 156 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RN7SKP295-201ENST00000517264 153 ntBASIC0.25□□□□□ -2.37
ACLYP53396 AP003357.1-201ENST00000604497 148 ntBASIC0.25□□□□□ -2.37
ACLYP53396 MTND1P7-201ENST00000632801 297 ntBASIC0.25□□□□□ -2.37
ACLYP53396 RNU6-1209P-201ENST00000363655 107 ntBASIC0.24□□□□□ -2.37
ACLYP53396 Y_RNA.318-201ENST00000365131 97 ntBASIC0.24□□□□□ -2.37
ACLYP53396 RNU6-934P-201ENST00000365154 107 ntBASIC0.24□□□□□ -2.37
ACLYP53396 RNU6-310P-201ENST00000384655 107 ntBASIC0.24□□□□□ -2.37
ACLYP53396 Y_RNA.605-201ENST00000410577 105 ntBASIC0.24□□□□□ -2.37
ACLYP53396 MTND4P17-201ENST00000470444 350 ntBASIC0.24□□□□□ -2.37
ACLYP53396 RNU7-181P-201ENST00000517234 74 ntBASIC0.24□□□□□ -2.37
ACLYP53396 AC024405.2-202ENST00000532731 184 ntBASIC0.24□□□□□ -2.37
ACLYP53396 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
ACLYP53396 AP000753.3-201ENST00000604083 169 ntBASIC0.24□□□□□ -2.37
ACLYP53396 MIR4791-201ENST00000607666 84 ntBASIC0.24□□□□□ -2.37
ACLYP53396 TPTEP1-208ENST00000636884 213 ntBASIC0.24□□□□□ -2.37
ACLYP53396 RNU6-1175P-201ENST00000365200 107 ntBASIC0.23□□□□□ -2.37
ACLYP53396 Y_RNA.456-201ENST00000384232 111 ntBASIC0.23□□□□□ -2.37
ACLYP53396 RNU6-35P-201ENST00000384530 107 ntBASIC0.23□□□□□ -2.37
ACLYP53396 SNORD116-4-201ENST00000384733 96 ntBASIC0.23□□□□□ -2.37
ACLYP53396 MTCO2P33-201ENST00000402100 465 ntBASIC0.23□□□□□ -2.37
ACLYP53396 AL590004.1-201ENST00000405321 300 ntBASIC0.23□□□□□ -2.37
ACLYP53396 Y_RNA.599-201ENST00000410489 109 ntBASIC0.23□□□□□ -2.37
ACLYP53396 RNU6-370P-201ENST00000411008 104 ntBASIC0.23□□□□□ -2.37
ACLYP53396 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
ACLYP53396 AC091951.2-201ENST00000500762 203 ntBASIC0.23□□□□□ -2.37
ACLYP53396 Y_RNA.691-201ENST00000516611 103 ntBASIC0.23□□□□□ -2.37
ACLYP53396 MIR5188-201ENST00000583467 113 ntBASIC0.23□□□□□ -2.37
ACLYP53396 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
ACLYP53396 U2.1-201ENST00000618978 145 ntBASIC0.23□□□□□ -2.37
ACLYP53396 AC098679.4-201ENST00000624241 654 ntBASIC0.23□□□□□ -2.37
ACLYP53396 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
ACLYP53396 RNU6-1188P-201ENST00000363795 107 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNU6-708P-201ENST00000384217 107 ntBASIC0.22□□□□□ -2.37
ACLYP53396 Y_RNA.570-201ENST00000384750 101 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNU6-205P-201ENST00000390858 107 ntBASIC0.22□□□□□ -2.37
ACLYP53396 AF228730.4-201ENST00000421457 183 ntBASIC0.22□□□□□ -2.37
ACLYP53396 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.22□□□□□ -2.37
ACLYP53396 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.22□□□□□ -2.37
ACLYP53396 AC005042.3-201ENST00000453230 174 ntBASIC0.22□□□□□ -2.37
ACLYP53396 Y_RNA.635-201ENST00000459041 101 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RPL23AP54-201ENST00000495129 419 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNU2-13P-201ENST00000515909 113 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNU7-115P-201ENST00000516433 55 ntBASIC0.22□□□□□ -2.37
ACLYP53396 RNA5SP476-201ENST00000516613 103 ntBASIC0.22□□□□□ -2.37
ACLYP53396 AC127455.1-201ENST00000565496 145 ntBASIC0.22□□□□□ -2.37
ACLYP53396 MIR4771-2-201ENST00000577758 74 ntBASIC0.22□□□□□ -2.37
ACLYP53396 MIR4771-1-201ENST00000582617 74 ntBASIC0.22□□□□□ -2.37
ACLYP53396 MIR4264-201ENST00000583520 66 ntBASIC0.22□□□□□ -2.37
ACLYP53396 AC008507.4-201ENST00000585464 127 ntBASIC0.22□□□□□ -2.37
ACLYP53396 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
ACLYP53396 U6.92-201ENST00000636464 89 ntBASIC0.22□□□□□ -2.37
ACLYP53396 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
ACLYP53396 U8.7-201ENST00000364940 136 ntBASIC0.21□□□□□ -2.38
ACLYP53396 SNORA1.2-201ENST00000365189 134 ntBASIC0.21□□□□□ -2.38
ACLYP53396 RNU6-890P-201ENST00000384121 107 ntBASIC0.21□□□□□ -2.38
ACLYP53396 Y_RNA.476-201ENST00000384347 108 ntBASIC0.21□□□□□ -2.38
ACLYP53396 RNU6-125P-201ENST00000384505 107 ntBASIC0.21□□□□□ -2.38
ACLYP53396 RNA5SP299-201ENST00000391203 116 ntBASIC0.21□□□□□ -2.38
ACLYP53396 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.21□□□□□ -2.38
ACLYP53396 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
ACLYP53396 SCARNA8-201ENST00000515924 131 ntBASIC0.21□□□□□ -2.38
ACLYP53396 RNU6-911P-201ENST00000516523 104 ntBASIC0.21□□□□□ -2.38
ACLYP53396 MIR4804-201ENST00000581683 73 ntBASIC0.21□□□□□ -2.38
ACLYP53396 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
ACLYP53396 AC084782.3-201ENST00000612282 578 ntBASIC0.21□□□□□ -2.38
ACLYP53396 AC138305.3-201ENST00000624988 240 ntBASIC0.21□□□□□ -2.38
ACLYP53396 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
ACLYP53396 Y_RNA.6-201ENST00000362350 114 ntBASIC0.2□□□□□ -2.38
ACLYP53396 Y_RNA.27-201ENST00000362540 103 ntBASIC0.2□□□□□ -2.38
ACLYP53396 MIR628-201ENST00000385229 95 ntBASIC0.2□□□□□ -2.38
ACLYP53396 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
ACLYP53396 SNORD72-201ENST00000390994 80 ntBASIC0.2□□□□□ -2.38
ACLYP53396 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.2□□□□□ -2.38
ACLYP53396 RNU6-847P-201ENST00000411115 108 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms