Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SNORA36B-201ENST00000410438 131 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 RNU6-130P-201ENST00000411112 103 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.5□□□□□ -2.33
CSNK1A1P48729 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.5□□□□□ -2.33
CSNK1A1P48729 RNU7-141P-201ENST00000459304 62 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 U8.20-201ENST00000459445 131 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.5□□□□□ -2.33
CSNK1A1P48729 RNU6-507P-201ENST00000516045 100 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 Y_RNA.676-201ENST00000516393 96 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
CSNK1A1P48729 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CSNK1A1P48729 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CSNK1A1P48729 RNU6-674P-201ENST00000363831 107 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 RNU4-50P-201ENST00000364361 141 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 Y_RNA.383-201ENST00000383855 97 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 RNY1P14-201ENST00000384426 108 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 SNORD72-201ENST00000390994 80 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 RNU6-437P-201ENST00000459408 95 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 RPL23AP91-201ENST00000569211 455 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.49□□□□□ -2.33
CSNK1A1P48729 AC012433.1-201ENST00000588916 398 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.49□□□□□ -2.33
CSNK1A1P48729 AL138825.1-201ENST00000618587 192 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.49□□□□□ -2.33
CSNK1A1P48729 AC112487.2-201ENST00000637950 304 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
CSNK1A1P48729 RNU4-80P-201ENST00000363200 141 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 Y_RNA.263-201ENST00000364659 114 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 Y_RNA.356-201ENST00000365475 113 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 SNORA72.4-201ENST00000384174 132 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 Y_RNA.471-201ENST00000384312 102 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 RNU6-21P-201ENST00000384710 107 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 SNORA26.5-201ENST00000391215 123 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 RNU6-613P-201ENST00000410412 108 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 SNORD11-201ENST00000459124 84 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 RNU6-976P-201ENST00000516086 111 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 RNU7-181P-201ENST00000517234 74 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 MIR548AO-201ENST00000579992 96 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 MIR2681-201ENST00000581814 105 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 AL080274.1-201ENST00000605565 220 ntBASIC0.48□□□□□ -2.33
CSNK1A1P48729 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 Y_RNA.579-201ENST00000390939 94 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 AC236972.2-201ENST00000434979 310 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 AC040926.1-201ENST00000530195 238 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 AC006157.1-201ENST00000611750 366 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 AC006441.5-201ENST00000612680 209 ntBASIC0.47□□□□□ -2.33
CSNK1A1P48729 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.46□□□□□ -2.34
CSNK1A1P48729 Y_RNA.197-201ENST00000364004 102 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 Y_RNA.222-201ENST00000364264 102 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 Y_RNA.537-201ENST00000384626 109 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 MIR802-201ENST00000390235 94 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU6-1009P-201ENST00000390996 107 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 MIR1827-201ENST00000408549 66 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 AC067940.1-201ENST00000458411 300 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 SEPT14P8-201ENST00000508026 178 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU2-13P-201ENST00000515909 113 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNU6-1046P-201ENST00000516538 107 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 Y_RNA.713-201ENST00000517013 96 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 AC005357.1-201ENST00000588399 301 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 SNORD113-5-201ENST00000607261 78 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 MIR4791-201ENST00000607666 84 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 AC007485.1-201ENST00000616755 206 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 MTND1P7-201ENST00000632801 297 ntBASIC0.46□□□□□ -2.34
CSNK1A1P48729 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
CSNK1A1P48729 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 Y_RNA.370-201ENST00000365589 108 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 Y_RNA.418-201ENST00000384029 102 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 SNORA51.10-201ENST00000384418 136 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 MIR1302-11-201ENST00000408051 138 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 MIR1302-9-201ENST00000408365 138 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 MIR1302-10-201ENST00000408734 138 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 AC005534.2-201ENST00000431047 433 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 POLR2KP2-201ENST00000438155 177 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
CSNK1A1P48729 RNU6-191P-201ENST00000516295 94 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 MIR2115-201ENST00000516657 100 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.45□□□□□ -2.34
CSNK1A1P48729 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 AL078603.1-201ENST00000603824 313 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 AC104695.3-201ENST00000604052 296 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 MIR1302-2-201ENST00000607096 138 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 AC015726.2-201ENST00000620112 122 ntBASIC0.45□□□□□ -2.34
CSNK1A1P48729 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms