Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC073648.5-201ENST00000603502 305 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC011373.1-201ENST00000607270 237 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC023158.2-201ENST00000614876 543 ntBASIC-1.11□□□□□ -2.59
HTTP42858 SNORD115-23-201ENST00000364461 82 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNY3P13-201ENST00000365542 102 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU6-245P-201ENST00000384020 107 ntBASIC-1.12□□□□□ -2.59
HTTP42858 SNORA72.6-201ENST00000384520 129 ntBASIC-1.12□□□□□ -2.59
HTTP42858 MIR548O-201ENST00000408583 114 ntBASIC-1.12□□□□□ -2.59
HTTP42858 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.12□□□□□ -2.59
HTTP42858 AL359672.1-201ENST00000442302 409 ntBASIC-1.12□□□□□ -2.59
HTTP42858 SNORD123-201ENST00000459473 70 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU7-13P-201ENST00000516413 62 ntBASIC-1.12□□□□□ -2.59
HTTP42858 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.12□□□□□ -2.59
HTTP42858 YWHAEP2-201ENST00000580066 112 ntBASIC-1.12□□□□□ -2.59
HTTP42858 AC133794.1-201ENST00000602731 914 ntBASIC-1.12□□□□□ -2.59
HTTP42858 AC008536.2-201ENST00000607284 349 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU6-819P-201ENST00000364116 107 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU6-777P-201ENST00000364265 104 ntBASIC-1.12□□□□□ -2.59
HTTP42858 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.12□□□□□ -2.59
HTTP42858 AC117522.1-201ENST00000509821 380 ntBASIC-1.12□□□□□ -2.59
HTTP42858 RNU6-966P-201ENST00000516479 104 ntBASIC-1.12□□□□□ -2.59
HTTP42858 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.13□□□□□ -2.59
HTTP42858 SNORD115-27-201ENST00000364430 82 ntBASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.13□□□□□ -2.59
HTTP42858 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-583P-201ENST00000516012 92 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC145423.2-201ENST00000610631 239 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC012409.4-201ENST00000612923 249 ntBASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-960P-201ENST00000364056 120 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-708P-201ENST00000384217 107 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.13□□□□□ -2.59
HTTP42858 MIR217-201ENST00000384817 110 ntBASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-466P-201ENST00000391224 103 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC018865.2-201ENST00000423631 129 ntBASIC-1.13□□□□□ -2.59
HTTP42858 SNORA25.14-201ENST00000516481 132 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC073539.2-201ENST00000597113 165 ntBASIC-1.13□□□□□ -2.59
HTTP42858 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.13□□□□□ -2.59
HTTP42858 MIR626-201ENST00000385032 94 ntBASIC-1.13□□□□□ -2.59
HTTP42858 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.13□□□□□ -2.59
HTTP42858 RNA5SP54-201ENST00000516951 92 ntBASIC-1.13□□□□□ -2.59
HTTP42858 SNORA40.17-201ENST00000517256 115 ntBASIC-1.13□□□□□ -2.59
HTTP42858 RNU6-208P-201ENST00000362431 107 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU6-449P-201ENST00000383914 107 ntBASIC-1.14□□□□□ -2.59
HTTP42858 MIR652-201ENST00000385278 98 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.14□□□□□ -2.59
HTTP42858 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.14□□□□□ -2.59
HTTP42858 RNU2-13P-201ENST00000515909 113 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU7-53P-201ENST00000516705 60 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.14□□□□□ -2.59
HTTP42858 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.14□□□□□ -2.59
HTTP42858 AC100814.1-201ENST00000606963 623 ntBASIC-1.14□□□□□ -2.59
HTTP42858 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.14□□□□□ -2.59
HTTP42858 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.14□□□□□ -2.59
HTTP42858 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU6-131P-201ENST00000391144 107 ntBASIC-1.14□□□□□ -2.59
HTTP42858 MTCYBP4-201ENST00000401524 249 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU4-61P-201ENST00000411243 107 ntBASIC-1.14□□□□□ -2.59
HTTP42858 MTND4P3-201ENST00000417829 541 ntBASIC-1.14□□□□□ -2.59
HTTP42858 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.14□□□□□ -2.59
HTTP42858 RNU6-118P-201ENST00000516552 102 ntBASIC-1.14□□□□□ -2.59
HTTP42858 AL137161.1-201ENST00000532231 390 ntBASIC-1.14□□□□□ -2.59
HTTP42858 MIR548H5-201ENST00000580314 60 ntBASIC-1.14□□□□□ -2.59
HTTP42858 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.14□□□□□ -2.59
HTTP42858 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.15□□□□□ -2.59
HTTP42858 RNU6-926P-201ENST00000384075 107 ntBASIC-1.15□□□□□ -2.59
HTTP42858 SNORA72-201ENST00000384339 132 ntBASIC-1.15□□□□□ -2.59
HTTP42858 MT-TM-201ENST00000387377 68 ntBASIC-1.15□□□□□ -2.59
HTTP42858 MIR548H3-201ENST00000408771 118 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AC244090.1-201ENST00000441884 93 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.15□□□□□ -2.59
HTTP42858 SNORD2-201ENST00000459163 69 ntBASIC-1.15□□□□□ -2.59
HTTP42858 MTCO1P29-201ENST00000496868 288 ntBASIC-1.15□□□□□ -2.59
HTTP42858 RNU7-10P-201ENST00000607194 63 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AL357078.3-201ENST00000607528 618 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AC231657.1-201ENST00000624313 397 ntBASIC-1.15□□□□□ -2.59
HTTP42858 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.15□□□□□ -2.59
HTTP42858 SNORD87-201ENST00000364849 89 ntBASIC-1.15□□□□□ -2.59
HTTP42858 MIR548I3-201ENST00000408378 149 ntBASIC-1.15□□□□□ -2.59
HTTP42858 MTCYBP8-201ENST00000422855 651 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AL450270.1-201ENST00000606160 391 ntBASIC-1.15□□□□□ -2.59
HTTP42858 RMST_10.1-201ENST00000616309 154 ntBASIC-1.15□□□□□ -2.59
HTTP42858 SNORD18.1-201ENST00000363807 70 ntBASIC-1.15□□□□□ -2.59
HTTP42858 RNU6-602P-201ENST00000411155 105 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AC084290.1-201ENST00000434995 374 ntBASIC-1.15□□□□□ -2.59
HTTP42858 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.15□□□□□ -2.59
HTTP42858 AC010587.1-201ENST00000505809 469 ntBASIC-1.15□□□□□ -2.59
HTTP42858 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.16□□□□□ -2.59
HTTP42858 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.16□□□□□ -2.59
HTTP42858 MTND2P18-201ENST00000419962 1030 ntBASIC-1.16□□□□□ -2.59
HTTP42858 AC018710.1-201ENST00000506509 158 ntBASIC-1.16□□□□□ -2.59
HTTP42858 MTND5P40-201ENST00000559945 246 ntBASIC-1.16□□□□□ -2.59
HTTP42858 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.16□□□□□ -2.59
HTTP42858 MIR8055-201ENST00000610739 97 ntBASIC-1.16□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms