Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXD13P35453 AC092473.1-201ENST00000441098 221 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 RNU6-830P-201ENST00000516353 107 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 RNU6-764P-201ENST00000516396 105 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.1□□□□□ -2.23
HOXD13P35453 MIR3171-201ENST00000584270 74 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 AC008507.4-201ENST00000585464 127 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 RNU6-326P-201ENST00000365480 107 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 Y_RNA.370-201ENST00000365589 108 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 RNU6-102P-201ENST00000384485 104 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 MTCO1P5-201ENST00000433573 344 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 NDUFA4P2-201ENST00000489989 244 ntBASIC1.09□□□□□ -2.23
HOXD13P35453 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.09□□□□□ -2.23
HOXD13P35453 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HOXD13P35453 AL442644.1-201ENST00000454390 3105 ntBASIC1.09□□□□□ -2.24
HOXD13P35453 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 Y_RNA.14-201ENST00000362415 103 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 Y_RNA.19-201ENST00000362462 99 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 RNU6-763P-201ENST00000390865 106 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 RPS26P48-201ENST00000491713 339 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 MRPS35P2-201ENST00000508242 191 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 RNU7-41P-201ENST00000515917 61 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 RNU11-2P-201ENST00000516898 142 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 AC131281.1-201ENST00000522984 164 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 AC134026.1-201ENST00000623249 2239 ntBASIC1.08□□□□□ -2.24
HOXD13P35453 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXD13P35453 Y_RNA.4-201ENST00000362333 112 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 Y_RNA.138-201ENST00000363462 102 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SNORA1.2-201ENST00000365189 134 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 Y_RNA.330-201ENST00000365230 109 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 SEPT14P17-201ENST00000617978 177 ntBASIC1.07□□□□□ -2.24
HOXD13P35453 Y_RNA.210-201ENST00000364161 110 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 RNU6-268P-201ENST00000364174 107 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 Y_RNA.527-201ENST00000384573 102 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 RNA5SP496-201ENST00000391240 109 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 MIR1278-201ENST00000408753 81 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXD13P35453 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXD13P35453 AC113195.1-201ENST00000579952 141 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 AC013791.1-201ENST00000616619 62 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 MIR4251-201ENST00000635819 61 ntBASIC1.06□□□□□ -2.24
HOXD13P35453 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HOXD13P35453 MIR367-201ENST00000362299 68 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 Y_RNA.214-201ENST00000364201 112 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 Y_RNA.394-201ENST00000383942 103 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 U8.17-201ENST00000391292 132 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 ELOCP20-201ENST00000422460 345 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 SNORD11-201ENST00000459124 84 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
HOXD13P35453 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.05□□□□□ -2.24
HOXD13P35453 PDCD5P2-201ENST00000507570 312 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 SCARNA8-201ENST00000515924 131 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
HOXD13P35453 SNORA25.3-201ENST00000363205 127 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 RNU6-121P-201ENST00000410525 99 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 POLR2J4-204ENST00000418424 324 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 SNRPGP14-201ENST00000435400 219 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXD13P35453 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.04□□□□□ -2.24
HOXD13P35453 AP003716.2-201ENST00000528260 108 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 MIR4724-201ENST00000579485 89 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 MIR4680-201ENST00000580906 66 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 MIR548AR-201ENST00000582191 57 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 AC044792.1-201ENST00000593294 196 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 AC015726.2-201ENST00000620112 122 ntBASIC1.04□□□□□ -2.24
HOXD13P35453 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXD13P35453 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HOXD13P35453 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 RNU6-1272P-201ENST00000362776 107 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 Y_RNA.105-201ENST00000363182 111 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 RNY1P10-201ENST00000363268 113 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 SNORD72-201ENST00000390994 80 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 AC113618.1-201ENST00000416747 285 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 AC020661.2-201ENST00000560114 134 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 MIR5692C2-201ENST00000577959 77 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 AL356055.1-201ENST00000602528 446 ntBASIC1.03□□□□□ -2.24
HOXD13P35453 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.03□□□□□ -2.24
HOXD13P35453 Y_RNA.11-201ENST00000362375 109 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 Y_RNA.293-201ENST00000364908 93 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 RNU6-639P-201ENST00000384074 107 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 Y_RNA.637-201ENST00000459424 114 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms