Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC010205.1-201ENST00000616668 449 ntBASIC0.31□□□□□ -2.36
HLA-DMAP28067 RMST_2.1-201ENST00000617263 136 ntBASIC0.31□□□□□ -2.36
HLA-DMAP28067 MIR548AY-201ENST00000617669 107 ntBASIC0.31□□□□□ -2.36
HLA-DMAP28067 AC139792.2-201ENST00000624218 587 ntBASIC0.31□□□□□ -2.36
HLA-DMAP28067 RNU6-580P-201ENST00000365159 107 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 RNU6-396P-201ENST00000365369 105 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 Y_RNA.370-201ENST00000365589 108 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 RNY4P36-201ENST00000391116 96 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 SNORA36B-201ENST00000410438 131 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 Y_RNA.619-201ENST00000410951 90 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 AC138393.2-201ENST00000414742 246 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
HLA-DMAP28067 RNU7-141P-201ENST00000459304 62 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 Y_RNA.661-201ENST00000516003 99 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 RNA5SP220-201ENST00000516298 104 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 Y_RNA.676-201ENST00000516393 96 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 MIR2115-201ENST00000516657 100 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 SNORD58B-201ENST00000607313 66 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 AL136317.1-201ENST00000612653 226 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 JPX_2.1-201ENST00000614161 69 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 MIR6734-201ENST00000621166 68 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 AC091925.1-201ENST00000623204 462 ntBASIC0.3□□□□□ -2.36
HLA-DMAP28067 Y_RNA.143-201ENST00000363520 106 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 Y_RNA.259-201ENST00000364619 101 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU6-1040P-201ENST00000383974 107 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 SNORA51.10-201ENST00000384418 136 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 SNORA26.5-201ENST00000391215 123 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNA5SP247-201ENST00000411181 105 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU6-177P-201ENST00000411257 104 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC099799.1-201ENST00000439809 192 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 U8.19-201ENST00000459095 133 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU2-13P-201ENST00000515909 113 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU4-77P-201ENST00000516692 156 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 SNORA20.3-201ENST00000516880 132 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 RNU7-110P-201ENST00000516891 62 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC092447.9-201ENST00000603395 144 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC020891.4-201ENST00000605745 93 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC011373.1-201ENST00000607270 237 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC015726.2-201ENST00000620112 122 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC243829.3-201ENST00000622177 108 ntBASIC0.29□□□□□ -2.36
HLA-DMAP28067 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.29□□□□□ -2.36
HLA-DMAP28067 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
HLA-DMAP28067 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 Y_RNA.387-201ENST00000383918 102 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 Y_RNA.462-201ENST00000384268 102 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 Y_RNA.537-201ENST00000384626 109 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 SNORD11-201ENST00000459124 84 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 RNU6-437P-201ENST00000459408 95 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 AC006441.5-201ENST00000612680 209 ntBASIC0.28□□□□□ -2.36
HLA-DMAP28067 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
HLA-DMAP28067 Y_RNA.5-201ENST00000362334 102 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 RNU4-80P-201ENST00000363200 141 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 Y_RNA.142-201ENST00000363491 102 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 Y_RNA.428-201ENST00000384078 102 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 MIR520F-201ENST00000384824 87 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 MIR573-201ENST00000384964 99 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 RNU6-130P-201ENST00000411112 103 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 AC098614.3-201ENST00000438957 440 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 SNORD116.3-201ENST00000517176 78 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 AC005357.1-201ENST00000588399 301 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 AL162730.1-201ENST00000605734 292 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 U6atac.1-201ENST00000616025 117 ntBASIC0.27□□□□□ -2.37
HLA-DMAP28067 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU6-1115P-201ENST00000362490 106 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU6-674P-201ENST00000363831 107 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 Y_RNA.383-201ENST00000383855 97 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 Y_RNA.547-201ENST00000384654 119 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 Y_RNA.551-201ENST00000384661 102 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 BTF3P11-201ENST00000426582 477 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.26□□□□□ -2.37
HLA-DMAP28067 Y_RNA.632-201ENST00000459189 102 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU7-25P-201ENST00000516544 62 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR4771-2-201ENST00000577758 74 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR3612-201ENST00000579753 87 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR4804-201ENST00000581683 73 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 MIR4771-1-201ENST00000582617 74 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 AC087685.1-201ENST00000587507 141 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 AL080274.1-201ENST00000605565 220 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 Y_RNA.772-201ENST00000606692 102 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 AL132765.2-201ENST00000610812 351 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 PART1_1.1-201ENST00000611761 217 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 AC007742.2-201ENST00000618226 398 ntBASIC0.26□□□□□ -2.37
HLA-DMAP28067 RNU1-133P-201ENST00000364867 167 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms