Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-864P-201ENST00000516256 108 ntBASIC-0.66□□□□□ -2.52
TPM1P09493 RNU6-155P-201ENST00000516347 100 ntBASIC-0.66□□□□□ -2.52
TPM1P09493 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.66□□□□□ -2.52
TPM1P09493 AP003357.1-201ENST00000604497 148 ntBASIC-0.66□□□□□ -2.52
TPM1P09493 MIR8066-201ENST00000617280 78 ntBASIC-0.66□□□□□ -2.52
TPM1P09493 MTND5P26-201ENST00000426018 1752 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 MIR30D-201ENST00000362283 70 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 MTND1P17-201ENST00000448961 204 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 RNU7-73P-201ENST00000458743 63 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 PRDX4P1-201ENST00000507189 574 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 RNU6-504P-201ENST00000516568 104 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 RNU6-273P-201ENST00000516937 96 ntBASIC-0.67□□□□□ -2.52
TPM1P09493 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 RNU6-451P-201ENST00000362921 107 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 RNU6-652P-201ENST00000365488 107 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 RNU6-958P-201ENST00000516995 106 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 AC024405.2-202ENST00000532731 184 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 MIR2681-201ENST00000581814 105 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 MIR3662-201ENST00000637030 95 ntBASIC-0.68□□□□□ -2.52
TPM1P09493 SNORD115-34-201ENST00000362441 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-12-201ENST00000362583 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-29-201ENST00000362834 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-9-201ENST00000362912 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-21-201ENST00000362963 81 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-14-201ENST00000363090 81 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-13-201ENST00000363358 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-41-201ENST00000363608 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-11-201ENST00000363616 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-5-201ENST00000363633 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-39-201ENST00000363694 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-4-201ENST00000363810 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-16-201ENST00000363887 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-6-201ENST00000363942 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-42-201ENST00000364273 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-15-201ENST00000364809 81 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-1-201ENST00000364961 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-26-201ENST00000365067 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-10-201ENST00000365073 81 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-43-201ENST00000365503 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-36-201ENST00000365629 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 RNU6-483P-201ENST00000384088 108 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 MIR214-201ENST00000385214 110 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 RNU4-83P-201ENST00000410863 133 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.69□□□□□ -2.52
TPM1P09493 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 AC138869.1-201ENST00000568623 124 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 AC119751.7-201ENST00000600494 245 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 AC121247.2-201ENST00000604776 136 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 SNORD115-40-201ENST00000606510 82 ntBASIC-0.69□□□□□ -2.52
TPM1P09493 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 RNY3P3-201ENST00000363816 102 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 RNU6-740P-201ENST00000364734 105 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 RNU6-913P-201ENST00000390913 95 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 AC074085.1-201ENST00000413598 418 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 AC127455.1-201ENST00000565496 145 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 MIR3152-201ENST00000579801 74 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 AC024933.1-201ENST00000608472 348 ntBASIC-0.7□□□□□ -2.52
TPM1P09493 RNU6-161P-201ENST00000363051 106 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 SNORD114-12-201ENST00000365400 75 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 MIR106A-201ENST00000384870 81 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 RNU6-602P-201ENST00000411155 105 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 MTCO1P5-201ENST00000433573 344 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 AC019235.1-201ENST00000503847 207 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 RNU6-320P-201ENST00000516511 106 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 RNU6-566P-201ENST00000516790 107 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 AC018462.2-201ENST00000605375 395 ntBASIC-0.71□□□□□ -2.52
TPM1P09493 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.71□□□□□ -2.52
TPM1P09493 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 SNORD93-201ENST00000408813 74 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 RNU7-25P-201ENST00000516544 62 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 SNORA31.14-201ENST00000516728 116 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.72□□□□□ -2.52
TPM1P09493 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.72□□□□□ -2.52
TPM1P09493 RNU4-75P-201ENST00000364621 146 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNU6-926P-201ENST00000384075 107 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 SNORD28-201ENST00000384706 75 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNU6-780P-201ENST00000391030 104 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNA5SP163-201ENST00000410304 99 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.73□□□□□ -2.53
TPM1P09493 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 RNU7-115P-201ENST00000516433 55 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 MIR4639-201ENST00000584938 69 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 AC092447.9-201ENST00000603395 144 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms