Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD72-201ENST00000390994 80 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 SUMO1P3-201ENST00000439961 304 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 RNU7-116P-201ENST00000516940 62 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 POLR3GP1-201ENST00000594073 261 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 MIR499B-201ENST00000636498 73 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 SNORA2A-201ENST00000383885 135 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNU6-756P-201ENST00000383997 107 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNU6-259P-201ENST00000383999 107 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 MIR563-201ENST00000385080 79 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 AL603910.2-201ENST00000407268 136 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 MTND2P22-201ENST00000444325 1033 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNU7-67P-201ENST00000459003 62 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNU6-966P-201ENST00000516479 104 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 MIR2355-201ENST00000517199 87 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 AP003357.1-201ENST00000604497 148 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 AC018462.2-201ENST00000605375 395 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 AC090582.1-201ENST00000636321 199 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 MIR3662-201ENST00000637030 95 ntBASIC-0.34□□□□□ -2.46
HLA-DQB2P05538 RNA5SP128-201ENST00000365305 116 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 SNORA26-201ENST00000391286 122 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 MCFD2P1-201ENST00000417812 300 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 snoU13.2-201ENST00000459201 104 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 AC026782.1-201ENST00000512952 449 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 RNU6-566P-201ENST00000516790 107 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 MIR5188-201ENST00000583467 113 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 AC090617.10-201ENST00000624308 134 ntBASIC-0.35□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 RNA5SP457-201ENST00000363657 124 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 RNU6-302P-201ENST00000365249 107 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 RNA5SP127-201ENST00000411051 133 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 AC074085.1-201ENST00000413598 418 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MTND2P9-201ENST00000422293 931 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 AC107297.1-201ENST00000459991 176 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 RNU6-958P-201ENST00000516995 106 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 AC024405.2-202ENST00000532731 184 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MTND3P12-201ENST00000559068 328 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 AC005176.2-201ENST00000596933 147 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR8055-201ENST00000610739 97 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR1244-1-201ENST00000612829 85 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR8066-201ENST00000617280 78 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR1244-3-201ENST00000635744 85 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR1244-2-201ENST00000636449 85 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR1244-4-202ENST00000636813 85 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 Z97988.1-201ENST00000637697 135 ntBASIC-0.36□□□□□ -2.47
HLA-DQB2P05538 MIR30D-201ENST00000362283 70 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU6-831P-201ENST00000384548 107 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 MT-TF-201ENST00000387314 71 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 MIR892B-201ENST00000401279 77 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU2-66P-201ENST00000410650 161 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RPL30P15-201ENST00000457129 321 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU7-159P-201ENST00000459284 62 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 PRDX4P1-201ENST00000507189 574 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU6-504P-201ENST00000516568 104 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 RNU6-782P-201ENST00000516852 104 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 AC127455.1-201ENST00000565496 145 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 uc_338.22-201ENST00000622722 187 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 MIR1321-201ENST00000637766 79 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 AC024614.3-201ENST00000637860 256 ntBASIC-0.37□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 MIR7-2-201ENST00000384970 110 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 MIR1278-201ENST00000408753 81 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 HMGN1P33-201ENST00000432945 451 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 AC104692.1-201ENST00000472406 90 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.38□□□□□ -2.47
HLA-DQB2P05538 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU6-20P-201ENST00000384106 107 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU6-913P-201ENST00000390913 95 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNA5SP118-201ENST00000410385 109 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU6-710P-201ENST00000410424 105 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU7-73P-201ENST00000458743 63 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RPL39P34-201ENST00000477141 156 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU6-470P-201ENST00000515954 104 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 RNU7-25P-201ENST00000516544 62 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms