Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SNORD115-34-201ENST00000362441 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-12-201ENST00000362583 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-29-201ENST00000362834 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-9-201ENST00000362912 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-21-201ENST00000362963 81 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-14-201ENST00000363090 81 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-13-201ENST00000363358 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-41-201ENST00000363608 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-11-201ENST00000363616 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-5-201ENST00000363633 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-39-201ENST00000363694 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-4-201ENST00000363810 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-16-201ENST00000363887 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-6-201ENST00000363942 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-42-201ENST00000364273 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-15-201ENST00000364809 81 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-1-201ENST00000364961 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-26-201ENST00000365067 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-10-201ENST00000365073 81 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-43-201ENST00000365503 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-36-201ENST00000365629 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORA1-201ENST00000384107 130 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 RNU6-913P-201ENST00000390913 95 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 BX295541.1-201ENST00000417774 250 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 EIF1P2-201ENST00000428233 350 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 RPL39P25-201ENST00000449384 154 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 AL118558.2-201ENST00000556294 238 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.12□□□□□ -2.59
TCRAP04437 AC008507.4-201ENST00000585464 127 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 SNORD115-40-201ENST00000606510 82 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 JPX_2.1-201ENST00000614161 69 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 AL596211.1-201ENST00000569873 2277 ntBASIC-1.12□□□□□ -2.59
TCRAP04437 RNU6-403P-201ENST00000363163 104 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 RNU4-75P-201ENST00000364621 146 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
TCRAP04437 SNORA3B-201ENST00000391305 131 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 RNA5SP118-201ENST00000410385 109 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.13□□□□□ -2.59
TCRAP04437 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.13□□□□□ -2.59
TCRAP04437 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 RNU6-958P-201ENST00000516995 106 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 AP001330.5-201ENST00000607176 411 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 AC245008.1-201ENST00000608123 476 ntBASIC-1.13□□□□□ -2.59
TCRAP04437 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 SNORA69-201ENST00000383895 132 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 RNU6-128P-201ENST00000383976 107 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 SNORD12C-201ENST00000386307 89 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 RNU2-61P-201ENST00000411069 191 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 SNORD42A-201ENST00000459584 64 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 RNA5SP66-201ENST00000517178 101 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 AC018645.2-201ENST00000609151 472 ntBASIC-1.14□□□□□ -2.59
TCRAP04437 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 RNU6-708P-201ENST00000384217 107 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 RNU6-437P-201ENST00000459408 95 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.15□□□□□ -2.59
TCRAP04437 AC010424.1-201ENST00000506336 297 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.15□□□□□ -2.59
TCRAP04437 AC092954.2-201ENST00000609103 430 ntBASIC-1.15□□□□□ -2.59
TCRAP04437 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.15□□□□□ -2.59
TCRAP04437 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 RNU6-192P-201ENST00000391253 100 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 MIR548L-201ENST00000408303 86 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 RNU7-53P-201ENST00000516705 60 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 AP003461.1-201ENST00000528866 78 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 AP000942.4-201ENST00000604811 241 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 AL354950.2-201ENST00000617939 290 ntBASIC-1.16□□□□□ -2.6
TCRAP04437 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
TCRAP04437 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 RNU6-767P-201ENST00000384132 107 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 RNU6-297P-201ENST00000384636 107 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 AL031003.1-201ENST00000404229 172 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 AC011352.1-201ENST00000512300 793 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 RNU6-966P-201ENST00000516479 104 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 MTND5P34-201ENST00000568888 325 ntBASIC-1.17□□□□□ -2.6
TCRAP04437 AC004223.4-201ENST00000612426 332 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms