Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.471-201ENST00000384312 102 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNU6-1009P-201ENST00000390996 107 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNA5SP95-201ENST00000410319 137 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
CD74P04233 AC236972.2-201ENST00000434979 310 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNU7-152P-201ENST00000458982 64 ntBASIC0.51□□□□□ -2.33
CD74P04233 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.51□□□□□ -2.33
CD74P04233 RNU7-115P-201ENST00000516433 55 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
CD74P04233 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.51□□□□□ -2.33
CD74P04233 AC127455.1-201ENST00000565496 145 ntBASIC0.51□□□□□ -2.33
CD74P04233 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.51□□□□□ -2.33
CD74P04233 MIR6835-201ENST00000621552 64 ntBASIC0.51□□□□□ -2.33
CD74P04233 AC091925.1-201ENST00000623204 462 ntBASIC0.51□□□□□ -2.33
CD74P04233 AC008133.2-201ENST00000624540 351 ntBASIC0.51□□□□□ -2.33
CD74P04233 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.51□□□□□ -2.33
CD74P04233 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CD74P04233 RNU4-80P-201ENST00000363200 141 ntBASIC0.5□□□□□ -2.33
CD74P04233 Y_RNA.383-201ENST00000383855 97 ntBASIC0.5□□□□□ -2.33
CD74P04233 RNU6-442P-201ENST00000383968 104 ntBASIC0.5□□□□□ -2.33
CD74P04233 Y_RNA.551-201ENST00000384661 102 ntBASIC0.5□□□□□ -2.33
CD74P04233 MIR7-2-201ENST00000384970 110 ntBASIC0.5□□□□□ -2.33
CD74P04233 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
CD74P04233 RNU2-14P-201ENST00000411053 191 ntBASIC0.5□□□□□ -2.33
CD74P04233 U8.20-201ENST00000459445 131 ntBASIC0.5□□□□□ -2.33
CD74P04233 HMGN1P10-201ENST00000474557 553 ntBASIC0.5□□□□□ -2.33
CD74P04233 NDUFA4P2-201ENST00000489989 244 ntBASIC0.5□□□□□ -2.33
CD74P04233 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
CD74P04233 FGF7P4-201ENST00000509595 295 ntBASIC0.5□□□□□ -2.33
CD74P04233 AC036111.3-201ENST00000526389 112 ntBASIC0.5□□□□□ -2.33
CD74P04233 RPL23AP91-201ENST00000569211 455 ntBASIC0.5□□□□□ -2.33
CD74P04233 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
CD74P04233 AL080274.1-201ENST00000605565 220 ntBASIC0.5□□□□□ -2.33
CD74P04233 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.5□□□□□ -2.33
CD74P04233 AL138825.1-201ENST00000618587 192 ntBASIC0.5□□□□□ -2.33
CD74P04233 Y_RNA.252-201ENST00000364556 101 ntBASIC0.49□□□□□ -2.33
CD74P04233 Y_RNA.286-201ENST00000364813 102 ntBASIC0.49□□□□□ -2.33
CD74P04233 RNU1-115P-201ENST00000365329 160 ntBASIC0.49□□□□□ -2.33
CD74P04233 SNORA2B-201ENST00000384583 137 ntBASIC0.49□□□□□ -2.33
CD74P04233 MIR508-201ENST00000384857 115 ntBASIC0.49□□□□□ -2.33
CD74P04233 Y_RNA.579-201ENST00000390939 94 ntBASIC0.49□□□□□ -2.33
CD74P04233 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.49□□□□□ -2.33
CD74P04233 MIR1302-7-201ENST00000408841 72 ntBASIC0.49□□□□□ -2.33
CD74P04233 SNORA36B-201ENST00000410438 131 ntBASIC0.49□□□□□ -2.33
CD74P04233 AC005534.2-201ENST00000431047 433 ntBASIC0.49□□□□□ -2.33
CD74P04233 POLR2KP2-201ENST00000438155 177 ntBASIC0.49□□□□□ -2.33
CD74P04233 AC067940.1-201ENST00000458411 300 ntBASIC0.49□□□□□ -2.33
CD74P04233 RNU7-141P-201ENST00000459304 62 ntBASIC0.49□□□□□ -2.33
CD74P04233 RNA5SP436-201ENST00000516020 115 ntBASIC0.49□□□□□ -2.33
CD74P04233 SNORA40.14-201ENST00000516543 86 ntBASIC0.49□□□□□ -2.33
CD74P04233 RNU7-181P-201ENST00000517234 74 ntBASIC0.49□□□□□ -2.33
CD74P04233 DEFB108E-201ENST00000524692 240 ntBASIC0.49□□□□□ -2.33
CD74P04233 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
CD74P04233 MIR4300-201ENST00000581016 96 ntBASIC0.49□□□□□ -2.33
CD74P04233 AL590095.2-201ENST00000604136 117 ntBASIC0.49□□□□□ -2.33
CD74P04233 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
CD74P04233 AC007742.2-201ENST00000618226 398 ntBASIC0.49□□□□□ -2.33
CD74P04233 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
CD74P04233 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
CD74P04233 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CD74P04233 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CD74P04233 Y_RNA.263-201ENST00000364659 114 ntBASIC0.48□□□□□ -2.33
CD74P04233 Y_RNA.315-201ENST00000365117 102 ntBASIC0.48□□□□□ -2.33
CD74P04233 Y_RNA.393-201ENST00000383936 102 ntBASIC0.48□□□□□ -2.33
CD74P04233 SNORD72-201ENST00000390994 80 ntBASIC0.48□□□□□ -2.33
CD74P04233 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
CD74P04233 AL392103.1-201ENST00000447000 198 ntBASIC0.48□□□□□ -2.33
CD74P04233 RNU6-1132P-201ENST00000459214 107 ntBASIC0.48□□□□□ -2.33
CD74P04233 U7.7-201ENST00000459276 60 ntBASIC0.48□□□□□ -2.33
CD74P04233 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
CD74P04233 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.48□□□□□ -2.33
CD74P04233 RNU6-976P-201ENST00000516086 111 ntBASIC0.48□□□□□ -2.33
CD74P04233 AC040926.1-201ENST00000530195 238 ntBASIC0.48□□□□□ -2.33
CD74P04233 PART1_1.1-201ENST00000611761 217 ntBASIC0.48□□□□□ -2.33
CD74P04233 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.48□□□□□ -2.33
CD74P04233 AC007485.1-201ENST00000616755 206 ntBASIC0.48□□□□□ -2.33
CD74P04233 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CD74P04233 AC015726.2-201ENST00000620112 122 ntBASIC0.48□□□□□ -2.33
CD74P04233 MIR6516-201ENST00000630554 81 ntBASIC0.48□□□□□ -2.33
CD74P04233 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CD74P04233 Y_RNA.36-201ENST00000362602 112 ntBASIC0.47□□□□□ -2.33
CD74P04233 RNU6-268P-201ENST00000364174 107 ntBASIC0.47□□□□□ -2.33
CD74P04233 SNORD63-201ENST00000384262 68 ntBASIC0.47□□□□□ -2.33
CD74P04233 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
CD74P04233 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
CD74P04233 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
CD74P04233 RNU6-130P-201ENST00000411112 103 ntBASIC0.47□□□□□ -2.33
CD74P04233 MTND5P20-201ENST00000448677 143 ntBASIC0.47□□□□□ -2.33
CD74P04233 RNU6-1046P-201ENST00000516538 107 ntBASIC0.47□□□□□ -2.33
CD74P04233 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
CD74P04233 MIR548S-201ENST00000581352 82 ntBASIC0.47□□□□□ -2.33
CD74P04233 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.47□□□□□ -2.33
CD74P04233 MIR4795-201ENST00000584182 89 ntBASIC0.47□□□□□ -2.33
CD74P04233 Y_RNA.804-201ENST00000615262 101 ntBASIC0.47□□□□□ -2.33
CD74P04233 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
CD74P04233 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
CD74P04233 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CD74P04233 RNU6-801P-201ENST00000364087 105 ntBASIC0.46□□□□□ -2.34
CD74P04233 RNU4-50P-201ENST00000364361 141 ntBASIC0.46□□□□□ -2.34
CD74P04233 SNORD113.3-201ENST00000364630 78 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms