Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.13□□□□□ -2.23
MT-ND1P03886 RNU6-922P-201ENST00000516753 99 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 Y_RNA.14-201ENST00000362415 103 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 RNU6-1084P-201ENST00000362498 107 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.76-201ENST00000362931 109 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.122-201ENST00000363331 96 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.277-201ENST00000364754 102 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.293-201ENST00000364908 93 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 RNU6-144P-201ENST00000383951 107 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.562-201ENST00000384695 113 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 MIR764-201ENST00000390811 85 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 SNORA17.3-201ENST00000391159 129 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 RNU6-1132P-201ENST00000459214 107 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 Y_RNA.680-201ENST00000516441 93 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.12□□□□□ -2.23
MT-ND1P03886 AL021707.8-201ENST00000609428 183 ntBASIC1.12□□□□□ -2.23
MT-ND1P03886 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.82-201ENST00000363000 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.92-201ENST00000363043 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.193-201ENST00000363979 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.235-201ENST00000364412 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.288-201ENST00000364854 92 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.306-201ENST00000365015 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.312-201ENST00000365089 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.322-201ENST00000365151 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 MIR516B2-201ENST00000385190 85 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 SNRPGP14-201ENST00000435400 219 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.650-201ENST00000459002 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.777-201ENST00000516982 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 AC090142.3-201ENST00000519012 385 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 AC090049.2-201ENST00000550377 109 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 MIR4282-201ENST00000583613 67 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.771-201ENST00000598668 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 AC011921.3-201ENST00000605540 361 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 AL162730.1-201ENST00000605734 292 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 JPX_2.1-201ENST00000614161 69 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 Y_RNA.789-201ENST00000622480 102 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 U6.104-201ENST00000637979 90 ntBASIC1.11□□□□□ -2.23
MT-ND1P03886 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MT-ND1P03886 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
MT-ND1P03886 Y_RNA.24-201ENST00000362508 103 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 snoU2-30.1-201ENST00000365012 70 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 Y_RNA.352-201ENST00000365439 102 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 SNORA2.2-201ENST00000365473 135 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 Y_RNA.539-201ENST00000384635 107 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.1□□□□□ -2.23
MT-ND1P03886 snoU13.23-201ENST00000458863 104 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.1□□□□□ -2.23
MT-ND1P03886 MIR2681-201ENST00000581814 105 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 AC008507.4-201ENST00000585464 127 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 FAM106DP-201ENST00000586416 501 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 U4.1-201ENST00000620349 87 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 AL442644.1-201ENST00000454390 3105 ntBASIC1.1□□□□□ -2.23
MT-ND1P03886 Y_RNA.54-201ENST00000362766 105 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 RNU6-196P-201ENST00000384315 107 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 Y_RNA.477-201ENST00000384352 108 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 MIR626-201ENST00000385032 94 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 RNU4-62P-201ENST00000410125 130 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 AC245047.8-201ENST00000456455 284 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 SNORD116-28-201ENST00000516123 91 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 MIR4724-201ENST00000579485 89 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
MT-ND1P03886 AL049861.1-201ENST00000603130 150 ntBASIC1.09□□□□□ -2.23
MT-ND1P03886 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
MT-ND1P03886 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
MT-ND1P03886 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MT-ND1P03886 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MT-ND1P03886 Y_RNA.336-201ENST00000365307 109 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 RNU6-463P-201ENST00000384340 107 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 Y_RNA.556-201ENST00000384677 113 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 MIR526A2-201ENST00000390198 65 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 MIR1302-3-201ENST00000408128 138 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 Y_RNA.590-201ENST00000410140 107 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 RNU7-95P-201ENST00000459222 64 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 Y_RNA.673-201ENST00000516306 88 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 AC100767.1-201ENST00000528178 123 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 MIR3128-201ENST00000581957 66 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MT-ND1P03886 AC062037.2-201ENST00000610137 73 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 Y_RNA.802-201ENST00000614892 130 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 AL365265.1-201ENST00000621045 234 ntBASIC1.08□□□□□ -2.24
MT-ND1P03886 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
MT-ND1P03886 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 SNORD27-201ENST00000363981 72 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 RNU6-268P-201ENST00000364174 107 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 snoU2_19.4-201ENST00000364329 80 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 Y_RNA.452-201ENST00000384202 108 ntBASIC1.07□□□□□ -2.24
MT-ND1P03886 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms