Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC097510.1-201ENST00000510945 133 ntBASIC-1.04□□□□□ -2.58
TNFP01375 SERF1AP1-201ENST00000514575 187 ntBASIC-1.04□□□□□ -2.58
TNFP01375 DEFB131E-201ENST00000532329 154 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.04□□□□□ -2.58
TNFP01375 MIR4423-201ENST00000580922 80 ntBASIC-1.04□□□□□ -2.58
TNFP01375 MIR4520-1-201ENST00000582609 70 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AC104010.1-201ENST00000616889 150 ntBASIC-1.04□□□□□ -2.58
TNFP01375 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AL158209.2-201ENST00000619266 216 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AL121895.2-201ENST00000619558 447 ntBASIC-1.04□□□□□ -2.58
TNFP01375 Z97988.1-201ENST00000637697 135 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AC073869.9-201ENST00000641610 120 ntBASIC-1.04□□□□□ -2.58
TNFP01375 MTND5P17-201ENST00000418405 1603 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.05□□□□□ -2.58
TNFP01375 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.05□□□□□ -2.58
TNFP01375 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.05□□□□□ -2.58
TNFP01375 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.05□□□□□ -2.58
TNFP01375 RNU6-434P-201ENST00000384376 107 ntBASIC-1.05□□□□□ -2.58
TNFP01375 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.05□□□□□ -2.58
TNFP01375 MT-TF-201ENST00000387314 71 ntBASIC-1.05□□□□□ -2.58
TNFP01375 SNORD93-201ENST00000408813 74 ntBASIC-1.05□□□□□ -2.58
TNFP01375 ELOCP4-201ENST00000420090 333 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AC084290.1-201ENST00000434995 374 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AC093423.1-201ENST00000440817 142 ntBASIC-1.05□□□□□ -2.58
TNFP01375 RPS29P24-201ENST00000486345 171 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.05□□□□□ -2.58
TNFP01375 RNU6-765P-201ENST00000516916 99 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AC134698.4-201ENST00000523451 826 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AC068339.1-201ENST00000526965 141 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AL356055.1-201ENST00000602528 446 ntBASIC-1.05□□□□□ -2.58
TNFP01375 AL512506.1-201ENST00000613918 449 ntBASIC-1.05□□□□□ -2.58
TNFP01375 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.05□□□□□ -2.58
TNFP01375 SNORA2.1-201ENST00000363089 137 ntBASIC-1.06□□□□□ -2.58
TNFP01375 RNU6-413P-201ENST00000384115 107 ntBASIC-1.06□□□□□ -2.58
TNFP01375 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.06□□□□□ -2.58
TNFP01375 MIR1285-2-201ENST00000408311 88 ntBASIC-1.06□□□□□ -2.58
TNFP01375 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.06□□□□□ -2.58
TNFP01375 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.06□□□□□ -2.58
TNFP01375 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.06□□□□□ -2.58
TNFP01375 RNU7-104P-201ENST00000459398 79 ntBASIC-1.06□□□□□ -2.58
TNFP01375 RNU6-412P-201ENST00000516434 106 ntBASIC-1.06□□□□□ -2.58
TNFP01375 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.06□□□□□ -2.58
TNFP01375 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.06□□□□□ -2.58
TNFP01375 MIR548AG2-201ENST00000581228 64 ntBASIC-1.06□□□□□ -2.58
TNFP01375 AC008536.2-201ENST00000607284 349 ntBASIC-1.06□□□□□ -2.58
TNFP01375 AP001282.2-201ENST00000616149 309 ntBASIC-1.06□□□□□ -2.58
TNFP01375 U4.2-201ENST00000618561 85 ntBASIC-1.06□□□□□ -2.58
TNFP01375 RNU6-403P-201ENST00000363163 104 ntBASIC-1.07□□□□□ -2.58
TNFP01375 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU6-901P-201ENST00000384593 106 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU2-11P-201ENST00000459191 187 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU6-437P-201ENST00000459408 95 ntBASIC-1.07□□□□□ -2.58
TNFP01375 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.07□□□□□ -2.58
TNFP01375 MTCO1P29-201ENST00000496868 288 ntBASIC-1.07□□□□□ -2.58
TNFP01375 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.07□□□□□ -2.58
TNFP01375 MIR4775-201ENST00000581168 75 ntBASIC-1.07□□□□□ -2.58
TNFP01375 AC005828.6-201ENST00000606610 232 ntBASIC-1.07□□□□□ -2.58
TNFP01375 AC132825.6-201ENST00000638861 357 ntBASIC-1.07□□□□□ -2.58
TNFP01375 AC099654.12-201ENST00000639868 649 ntBASIC-1.07□□□□□ -2.58
TNFP01375 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.08□□□□□ -2.58
TNFP01375 SNORD115-42-201ENST00000364273 82 ntBASIC-1.08□□□□□ -2.58
TNFP01375 RNU1-141P-201ENST00000364623 158 ntBASIC-1.08□□□□□ -2.58
TNFP01375 SNORD114-17-201ENST00000364699 75 ntBASIC-1.08□□□□□ -2.58
TNFP01375 SNORD116.1-201ENST00000365628 92 ntBASIC-1.08□□□□□ -2.58
TNFP01375 SNORD38B-201ENST00000384690 67 ntBASIC-1.08□□□□□ -2.58
TNFP01375 MIR487B-201ENST00000385021 84 ntBASIC-1.08□□□□□ -2.58
TNFP01375 RNU6-847P-201ENST00000411115 108 ntBASIC-1.08□□□□□ -2.58
TNFP01375 RNU6-325P-201ENST00000411132 105 ntBASIC-1.08□□□□□ -2.58
TNFP01375 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.08□□□□□ -2.58
TNFP01375 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.08□□□□□ -2.58
TNFP01375 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.08□□□□□ -2.58
TNFP01375 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.08□□□□□ -2.58
TNFP01375 RNU6-107P-201ENST00000516643 102 ntBASIC-1.08□□□□□ -2.58
TNFP01375 MIR4770-201ENST00000579149 58 ntBASIC-1.08□□□□□ -2.58
TNFP01375 MIR3920-201ENST00000581751 86 ntBASIC-1.08□□□□□ -2.58
TNFP01375 AL136370.1-201ENST00000608166 691 ntBASIC-1.08□□□□□ -2.58
TNFP01375 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.08□□□□□ -2.58
TNFP01375 MIR376A2-201ENST00000636782 80 ntBASIC-1.08□□□□□ -2.58
TNFP01375 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.09□□□□□ -2.58
TNFP01375 RNU6-324P-201ENST00000363957 106 ntBASIC-1.09□□□□□ -2.58
TNFP01375 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.09□□□□□ -2.58
TNFP01375 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.09□□□□□ -2.58
TNFP01375 RNU6-973P-201ENST00000364690 107 ntBASIC-1.09□□□□□ -2.58
TNFP01375 RNU6-169P-201ENST00000365336 107 ntBASIC-1.09□□□□□ -2.58
TNFP01375 RNU6-571P-201ENST00000384128 107 ntBASIC-1.09□□□□□ -2.58
TNFP01375 SNORD38C-201ENST00000384381 69 ntBASIC-1.09□□□□□ -2.58
TNFP01375 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
TNFP01375 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.09□□□□□ -2.58
TNFP01375 MTATP6P14-201ENST00000455189 673 ntBASIC-1.09□□□□□ -2.58
TNFP01375 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.09□□□□□ -2.58
TNFP01375 AC069113.1-201ENST00000517763 267 ntBASIC-1.09□□□□□ -2.58
TNFP01375 AC127455.1-201ENST00000565496 145 ntBASIC-1.09□□□□□ -2.58
TNFP01375 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.09□□□□□ -2.58
TNFP01375 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.09□□□□□ -2.58
TNFP01375 AC245014.2-201ENST00000603689 287 ntBASIC-1.09□□□□□ -2.58
TNFP01375 MIR6854-201ENST00000614935 69 ntBASIC-1.09□□□□□ -2.58
TNFP01375 MIR6818-201ENST00000621576 65 ntBASIC-1.09□□□□□ -2.58
TNFP01375 MIR6874-201ENST00000635894 71 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms