Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 snoU2_19.2-201ENST00000363024 80 ntBASIC1.33□□□□□ -2.2
DDX58O95786 RNU6-899P-201ENST00000363947 107 ntBASIC1.33□□□□□ -2.2
DDX58O95786 Y_RNA.276-201ENST00000364732 109 ntBASIC1.33□□□□□ -2.2
DDX58O95786 Y_RNA.541-201ENST00000384640 113 ntBASIC1.33□□□□□ -2.2
DDX58O95786 MIR136-201ENST00000385207 82 ntBASIC1.33□□□□□ -2.2
DDX58O95786 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
DDX58O95786 MIR1278-201ENST00000408753 81 ntBASIC1.33□□□□□ -2.2
DDX58O95786 HMGN2P32-201ENST00000444648 269 ntBASIC1.33□□□□□ -2.2
DDX58O95786 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
DDX58O95786 RPL23AP91-201ENST00000569211 455 ntBASIC1.33□□□□□ -2.2
DDX58O95786 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
DDX58O95786 AC007742.2-201ENST00000618226 398 ntBASIC1.33□□□□□ -2.2
DDX58O95786 MIR6734-201ENST00000621166 68 ntBASIC1.33□□□□□ -2.2
DDX58O95786 Y_RNA.26-201ENST00000362539 101 ntBASIC1.32□□□□□ -2.2
DDX58O95786 Y_RNA.153-201ENST00000363615 91 ntBASIC1.32□□□□□ -2.2
DDX58O95786 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
DDX58O95786 RNU6-42P-201ENST00000384165 107 ntBASIC1.32□□□□□ -2.2
DDX58O95786 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
DDX58O95786 RNU6-763P-201ENST00000390865 106 ntBASIC1.32□□□□□ -2.2
DDX58O95786 MTND4LP30-201ENST00000454092 297 ntBASIC1.32□□□□□ -2.2
DDX58O95786 RNA5SP220-201ENST00000516298 104 ntBASIC1.32□□□□□ -2.2
DDX58O95786 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
DDX58O95786 AC005357.1-201ENST00000588399 301 ntBASIC1.32□□□□□ -2.2
DDX58O95786 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.32□□□□□ -2.2
DDX58O95786 RNU6-1205P-201ENST00000363625 106 ntBASIC1.31□□□□□ -2.2
DDX58O95786 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
DDX58O95786 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
DDX58O95786 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.31□□□□□ -2.2
DDX58O95786 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
DDX58O95786 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
DDX58O95786 RNU6-326P-201ENST00000365480 107 ntBASIC1.3□□□□□ -2.2
DDX58O95786 Y_RNA.422-201ENST00000384054 114 ntBASIC1.3□□□□□ -2.2
DDX58O95786 RNU6-1054P-201ENST00000411293 104 ntBASIC1.3□□□□□ -2.2
DDX58O95786 AC245047.7-201ENST00000440265 293 ntBASIC1.3□□□□□ -2.2
DDX58O95786 AL731563.1-201ENST00000442202 214 ntBASIC1.3□□□□□ -2.2
DDX58O95786 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
DDX58O95786 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
DDX58O95786 RNU6-1007P-201ENST00000516586 107 ntBASIC1.3□□□□□ -2.2
DDX58O95786 SNORA18.7-201ENST00000516910 131 ntBASIC1.3□□□□□ -2.2
DDX58O95786 SCARNA24.2-201ENST00000516968 130 ntBASIC1.3□□□□□ -2.2
DDX58O95786 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
DDX58O95786 AC090142.3-201ENST00000519012 385 ntBASIC1.3□□□□□ -2.2
DDX58O95786 AP003072.1-201ENST00000531740 145 ntBASIC1.3□□□□□ -2.2
DDX58O95786 RMST_2.1-201ENST00000617263 136 ntBASIC1.3□□□□□ -2.2
DDX58O95786 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.3□□□□□ -2.2
DDX58O95786 RNU6-662P-201ENST00000384253 104 ntBASIC1.29□□□□□ -2.2
DDX58O95786 MIR520E-201ENST00000384867 87 ntBASIC1.29□□□□□ -2.2
DDX58O95786 AC113618.1-201ENST00000416747 285 ntBASIC1.29□□□□□ -2.2
DDX58O95786 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
DDX58O95786 AC091959.1-201ENST00000495857 238 ntBASIC1.29□□□□□ -2.2
DDX58O95786 RNU6-570P-201ENST00000517051 105 ntBASIC1.29□□□□□ -2.2
DDX58O95786 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
DDX58O95786 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
DDX58O95786 Y_RNA.16-201ENST00000362421 102 ntBASIC1.28□□□□□ -2.2
DDX58O95786 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
DDX58O95786 Y_RNA.293-201ENST00000364908 93 ntBASIC1.28□□□□□ -2.2
DDX58O95786 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
DDX58O95786 SNORD38C-201ENST00000384381 69 ntBASIC1.28□□□□□ -2.2
DDX58O95786 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
DDX58O95786 BTF3P11-201ENST00000426582 477 ntBASIC1.28□□□□□ -2.2
DDX58O95786 AC023449.1-201ENST00000454464 154 ntBASIC1.28□□□□□ -2.2
DDX58O95786 MTND5P22-201ENST00000458380 195 ntBASIC1.28□□□□□ -2.2
DDX58O95786 AC087685.1-201ENST00000587507 141 ntBASIC1.28□□□□□ -2.2
DDX58O95786 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
DDX58O95786 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
DDX58O95786 Y_RNA.84-201ENST00000363011 104 ntBASIC1.27□□□□□ -2.21
DDX58O95786 SNORA63-201ENST00000363450 132 ntBASIC1.27□□□□□ -2.21
DDX58O95786 RNU4-38P-201ENST00000364472 129 ntBASIC1.27□□□□□ -2.21
DDX58O95786 RNU6-144P-201ENST00000383951 107 ntBASIC1.27□□□□□ -2.21
DDX58O95786 RNU6-713P-201ENST00000384761 107 ntBASIC1.27□□□□□ -2.21
DDX58O95786 MIR15B-201ENST00000385045 98 ntBASIC1.27□□□□□ -2.21
DDX58O95786 Y_RNA.637-201ENST00000459424 114 ntBASIC1.27□□□□□ -2.21
DDX58O95786 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
DDX58O95786 AC006504.6-201ENST00000590142 199 ntBASIC1.27□□□□□ -2.21
DDX58O95786 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
DDX58O95786 AC013791.1-201ENST00000616619 62 ntBASIC1.27□□□□□ -2.21
DDX58O95786 Y_RNA.14-201ENST00000362415 103 ntBASIC1.26□□□□□ -2.21
DDX58O95786 RNU6-238P-201ENST00000363313 106 ntBASIC1.26□□□□□ -2.21
DDX58O95786 RNU6-969P-201ENST00000383900 105 ntBASIC1.26□□□□□ -2.21
DDX58O95786 Y_RNA.466-201ENST00000384294 113 ntBASIC1.26□□□□□ -2.21
DDX58O95786 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.26□□□□□ -2.21
DDX58O95786 NDUFA4P2-201ENST00000489989 244 ntBASIC1.26□□□□□ -2.21
DDX58O95786 SNORA74.3-201ENST00000517108 154 ntBASIC1.26□□□□□ -2.21
DDX58O95786 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
DDX58O95786 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
DDX58O95786 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
DDX58O95786 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
DDX58O95786 RNU6-383P-201ENST00000410864 94 ntBASIC1.25□□□□□ -2.21
DDX58O95786 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.25□□□□□ -2.21
DDX58O95786 SNORA27.4-201ENST00000516650 95 ntBASIC1.25□□□□□ -2.21
DDX58O95786 RNU6-635P-201ENST00000516651 102 ntBASIC1.25□□□□□ -2.21
DDX58O95786 DEFB108E-201ENST00000524692 240 ntBASIC1.25□□□□□ -2.21
DDX58O95786 MIR5692C2-201ENST00000577959 77 ntBASIC1.25□□□□□ -2.21
DDX58O95786 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.25□□□□□ -2.21
DDX58O95786 MIR367-201ENST00000362299 68 ntBASIC1.24□□□□□ -2.21
DDX58O95786 AC063976.4-201ENST00000421971 163 ntBASIC1.24□□□□□ -2.21
DDX58O95786 MTATP8P1-201ENST00000467115 207 ntBASIC1.24□□□□□ -2.21
DDX58O95786 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
DDX58O95786 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
DDX58O95786 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms