Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX4O60224 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
SSX4O60224 AL008718.3-201ENST00000610217 321 ntBASIC1.29□□□□□ -2.2
SSX4O60224 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
SSX4O60224 Y_RNA.47-201ENST00000362697 108 ntBASIC1.28□□□□□ -2.2
SSX4O60224 Y_RNA.269-201ENST00000364685 89 ntBASIC1.28□□□□□ -2.2
SSX4O60224 MIR516B2-201ENST00000385190 85 ntBASIC1.28□□□□□ -2.2
SSX4O60224 RNU6-383P-201ENST00000410864 94 ntBASIC1.28□□□□□ -2.2
SSX4O60224 MTND2P23-201ENST00000422990 651 ntBASIC1.28□□□□□ -2.2
SSX4O60224 AL358176.2-201ENST00000425769 204 ntBASIC1.28□□□□□ -2.2
SSX4O60224 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
SSX4O60224 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.28□□□□□ -2.2
SSX4O60224 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
SSX4O60224 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
SSX4O60224 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SSX4O60224 Y_RNA.44-201ENST00000362676 108 ntBASIC1.27□□□□□ -2.21
SSX4O60224 RNU6-1309P-201ENST00000363305 108 ntBASIC1.27□□□□□ -2.21
SSX4O60224 Y_RNA.162-201ENST00000363683 102 ntBASIC1.27□□□□□ -2.21
SSX4O60224 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
SSX4O60224 Y_RNA.275-201ENST00000364726 110 ntBASIC1.27□□□□□ -2.21
SSX4O60224 Y_RNA.293-201ENST00000364908 93 ntBASIC1.27□□□□□ -2.21
SSX4O60224 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
SSX4O60224 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
SSX4O60224 RNU6-472P-201ENST00000384299 107 ntBASIC1.27□□□□□ -2.21
SSX4O60224 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
SSX4O60224 SNORD11-201ENST00000459124 84 ntBASIC1.27□□□□□ -2.21
SSX4O60224 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.27□□□□□ -2.21
SSX4O60224 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
SSX4O60224 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.27□□□□□ -2.21
SSX4O60224 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
SSX4O60224 AC087685.1-201ENST00000587507 141 ntBASIC1.27□□□□□ -2.21
SSX4O60224 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
SSX4O60224 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.27□□□□□ -2.21
SSX4O60224 U6.104-201ENST00000637979 90 ntBASIC1.27□□□□□ -2.21
SSX4O60224 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SSX4O60224 Y_RNA.117-201ENST00000363294 101 ntBASIC1.26□□□□□ -2.21
SSX4O60224 RNU6-1289P-201ENST00000384431 106 ntBASIC1.26□□□□□ -2.21
SSX4O60224 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
SSX4O60224 MIR136-201ENST00000385207 82 ntBASIC1.26□□□□□ -2.21
SSX4O60224 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
SSX4O60224 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
SSX4O60224 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
SSX4O60224 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
SSX4O60224 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SSX4O60224 MIR335-201ENST00000362173 94 ntBASIC1.25□□□□□ -2.21
SSX4O60224 Y_RNA.149-201ENST00000363558 117 ntBASIC1.25□□□□□ -2.21
SSX4O60224 RNU6-740P-201ENST00000364734 105 ntBASIC1.25□□□□□ -2.21
SSX4O60224 Y_RNA.396-201ENST00000383949 103 ntBASIC1.25□□□□□ -2.21
SSX4O60224 RNU6-211P-201ENST00000384047 107 ntBASIC1.25□□□□□ -2.21
SSX4O60224 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.25□□□□□ -2.21
SSX4O60224 AC008507.4-201ENST00000585464 127 ntBASIC1.25□□□□□ -2.21
SSX4O60224 AL357312.1-201ENST00000603879 298 ntBASIC1.25□□□□□ -2.21
SSX4O60224 U2.14-201ENST00000615943 113 ntBASIC1.25□□□□□ -2.21
SSX4O60224 MIR367-201ENST00000362299 68 ntBASIC1.24□□□□□ -2.21
SSX4O60224 Y_RNA.14-201ENST00000362415 103 ntBASIC1.24□□□□□ -2.21
SSX4O60224 RNU6-442P-201ENST00000383968 104 ntBASIC1.24□□□□□ -2.21
SSX4O60224 MIR802-201ENST00000390235 94 ntBASIC1.24□□□□□ -2.21
SSX4O60224 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.24□□□□□ -2.21
SSX4O60224 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
SSX4O60224 RNU6-1045P-201ENST00000516321 107 ntBASIC1.24□□□□□ -2.21
SSX4O60224 MIR4724-201ENST00000579485 89 ntBASIC1.24□□□□□ -2.21
SSX4O60224 AC099654.10-201ENST00000640395 161 ntBASIC1.24□□□□□ -2.21
SSX4O60224 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SSX4O60224 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
SSX4O60224 Y_RNA.118-201ENST00000363300 101 ntBASIC1.23□□□□□ -2.21
SSX4O60224 Y_RNA.133-201ENST00000363428 110 ntBASIC1.23□□□□□ -2.21
SSX4O60224 RNU4-10P-201ENST00000364383 140 ntBASIC1.23□□□□□ -2.21
SSX4O60224 SNORD72-201ENST00000390994 80 ntBASIC1.23□□□□□ -2.21
SSX4O60224 RNU6-651P-201ENST00000411040 105 ntBASIC1.23□□□□□ -2.21
SSX4O60224 RNU6-1007P-201ENST00000516586 107 ntBASIC1.23□□□□□ -2.21
SSX4O60224 AL353621.2-201ENST00000605340 133 ntBASIC1.23□□□□□ -2.21
SSX4O60224 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
SSX4O60224 AC091895.1-201ENST00000624494 256 ntBASIC1.23□□□□□ -2.21
SSX4O60224 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SSX4O60224 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
SSX4O60224 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
SSX4O60224 Y_RNA.518-201ENST00000384552 113 ntBASIC1.22□□□□□ -2.21
SSX4O60224 AL603910.2-201ENST00000407268 136 ntBASIC1.22□□□□□ -2.21
SSX4O60224 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
SSX4O60224 AC023449.1-201ENST00000454464 154 ntBASIC1.22□□□□□ -2.21
SSX4O60224 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
SSX4O60224 MTCO2P24-201ENST00000515611 426 ntBASIC1.22□□□□□ -2.21
SSX4O60224 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
SSX4O60224 SNORA18.7-201ENST00000516910 131 ntBASIC1.22□□□□□ -2.21
SSX4O60224 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.22□□□□□ -2.21
SSX4O60224 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
SSX4O60224 AL021707.8-201ENST00000609428 183 ntBASIC1.22□□□□□ -2.21
SSX4O60224 MIR7111-201ENST00000619751 72 ntBASIC1.22□□□□□ -2.21
SSX4O60224 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
SSX4O60224 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
SSX4O60224 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
SSX4O60224 SNORD38C-201ENST00000384381 69 ntBASIC1.21□□□□□ -2.22
SSX4O60224 Y_RNA.508-201ENST00000384502 114 ntBASIC1.21□□□□□ -2.22
SSX4O60224 MIR526A2-201ENST00000390198 65 ntBASIC1.21□□□□□ -2.22
SSX4O60224 RNA5SP496-201ENST00000391240 109 ntBASIC1.21□□□□□ -2.22
SSX4O60224 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
SSX4O60224 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
SSX4O60224 SNORA74.3-201ENST00000517108 154 ntBASIC1.21□□□□□ -2.22
SSX4O60224 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
SSX4O60224 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 387.1 ms