Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 AC005534.2-201ENST00000431047 433 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
CHMP2AO43633 HMGN2P32-201ENST00000444648 269 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.36□□□□□ -2.35
CHMP2AO43633 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.36□□□□□ -2.35
CHMP2AO43633 AC067940.1-201ENST00000458411 300 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 Y_RNA.653-201ENST00000459091 95 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 AC144568.1-201ENST00000520139 137 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 AC022616.4-201ENST00000522985 181 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 MIR5690-201ENST00000583739 73 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 RBM11P1-201ENST00000604951 799 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 AC015726.2-201ENST00000620112 122 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
CHMP2AO43633 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
CHMP2AO43633 Y_RNA.166-201ENST00000363730 102 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 Y_RNA.540-201ENST00000384638 111 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 RNU6-613P-201ENST00000410412 108 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 FGF7P6-202ENST00000451282 293 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 RNU6-277P-201ENST00000516272 106 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 RNU7-115P-201ENST00000516433 55 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AC127455.1-201ENST00000565496 145 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 MIR4423-201ENST00000580922 80 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AP003357.1-201ENST00000604497 148 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AL355073.2-201ENST00000612106 557 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 Pinc.1-201ENST00000616452 154 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
CHMP2AO43633 MIR1-1-201ENST00000362147 71 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 Y_RNA.27-201ENST00000362540 103 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 Y_RNA.286-201ENST00000364813 102 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CHMP2AO43633 Y_RNA.390-201ENST00000383932 102 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 RNU6-937P-201ENST00000384325 106 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 RNU6-1067P-201ENST00000384752 107 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 MIR15B-201ENST00000385045 98 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 RNU2-70P-201ENST00000410718 179 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 AC005042.3-201ENST00000453230 174 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 RNA5SP480-201ENST00000516840 109 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.34□□□□□ -2.36
CHMP2AO43633 RPL23AP91-201ENST00000569211 455 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 MIR4791-201ENST00000607666 84 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 AC092794.1-201ENST00000612734 582 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 MIR4272-201ENST00000635924 64 ntBASIC0.34□□□□□ -2.36
CHMP2AO43633 Y_RNA.36-201ENST00000362602 112 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 Y_RNA.168-201ENST00000363740 102 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 SNORD38C-201ENST00000384381 69 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 SNORA51.10-201ENST00000384418 136 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 MTND1P34-201ENST00000438556 671 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 RNU7-141P-201ENST00000459304 62 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 RNU11-2P-201ENST00000516898 142 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.33□□□□□ -2.36
CHMP2AO43633 AC008507.4-201ENST00000585464 127 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 AC113139.1-201ENST00000605049 239 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 LARP7P1-201ENST00000605576 316 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 AC020891.4-201ENST00000605745 93 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 JPX_2.1-201ENST00000614161 69 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 MIR548AY-201ENST00000617669 107 ntBASIC0.33□□□□□ -2.36
CHMP2AO43633 Y_RNA.230-201ENST00000364348 109 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 Y_RNA.458-201ENST00000384240 102 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 Y_RNA.463-201ENST00000384271 102 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 MIR520F-201ENST00000384824 87 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 SNORA26.5-201ENST00000391215 123 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 BTF3P11-201ENST00000426582 477 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 RNU7-110P-201ENST00000516891 62 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 MIR4771-2-201ENST00000577758 74 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 MIR4771-1-201ENST00000582617 74 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 MIR5188-201ENST00000583467 113 ntBASIC0.32□□□□□ -2.36
CHMP2AO43633 RNU4-80P-201ENST00000363200 141 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 Y_RNA.143-201ENST00000363520 106 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 RNU6-801P-201ENST00000364087 105 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 RNU4-50P-201ENST00000364361 141 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 Y_RNA.259-201ENST00000364619 101 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 RNU6-442P-201ENST00000383968 104 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 MIR573-201ENST00000384964 99 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 RNY4P36-201ENST00000391116 96 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 MIR2115-201ENST00000516657 100 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 Y_RNA.718-201ENST00000517110 102 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 AC005357.1-201ENST00000588399 301 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 SNORD58B-201ENST00000607313 66 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
CHMP2AO43633 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHMP2AO43633 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 MIR18A-201ENST00000362310 71 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-490P-201ENST00000362985 107 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-396P-201ENST00000365369 105 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 Y_RNA.370-201ENST00000365589 108 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-1040P-201ENST00000383974 107 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 Y_RNA.456-201ENST00000384232 111 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 MIR802-201ENST00000390235 94 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 SNORA36B-201ENST00000410438 131 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 Y_RNA.619-201ENST00000410951 90 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-130P-201ENST00000411112 103 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms