Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP003357.1-201ENST00000604497 148 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 AC010487.4-201ENST00000637027 61 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 SNORA63C-201ENST00000364578 129 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 RNU6-1175P-201ENST00000365200 107 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 RNU6-364P-201ENST00000384387 107 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.06□□□□□ -2.4
UPK1AO00322 RNU7-115P-201ENST00000516433 55 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 RNU6-966P-201ENST00000516479 104 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.06□□□□□ -2.4
UPK1AO00322 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.06□□□□□ -2.4
UPK1AO00322 AC127455.1-201ENST00000565496 145 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 AC011712.1-201ENST00000588959 234 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 AC020891.4-201ENST00000605745 93 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 SNORA25.18-201ENST00000607153 114 ntBASIC0.06□□□□□ -2.4
UPK1AO00322 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
UPK1AO00322 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
UPK1AO00322 Y_RNA.436-201ENST00000384097 102 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 AL590004.1-201ENST00000405321 300 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 snoU13.16-201ENST00000459350 104 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 RNU6-120P-201ENST00000516077 103 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 RNA5SP94-201ENST00000516917 108 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 EIF1P4-201ENST00000572664 335 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 MIR4514-201ENST00000581410 57 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
UPK1AO00322 AL080274.1-201ENST00000605565 220 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 MIR548AY-201ENST00000617669 107 ntBASIC0.05□□□□□ -2.4
UPK1AO00322 RNY3P11-201ENST00000364153 102 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-1319P-201ENST00000390855 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-747P-201ENST00000390928 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-241P-201ENST00000391148 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 MIR1277-201ENST00000408536 78 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-447P-201ENST00000410293 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-1118P-201ENST00000410382 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-1076P-201ENST00000410397 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-355P-201ENST00000410427 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-791P-201ENST00000410467 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-705P-201ENST00000410601 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-1100P-201ENST00000410691 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-860P-201ENST00000410860 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-1217P-201ENST00000411276 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-785P-201ENST00000411324 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RNU6-720P-201ENST00000516363 108 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 SNORA18.4-201ENST00000516440 124 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.04□□□□□ -2.4
UPK1AO00322 RPL23AP91-201ENST00000569211 455 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 AL355297.3-201ENST00000604082 446 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 AC006441.5-201ENST00000612680 209 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 U6.90-201ENST00000614007 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 AC090517.2-201ENST00000614966 680 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 U2.1-201ENST00000618978 145 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 AC134878.1-201ENST00000619901 243 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 U6.70-201ENST00000620287 104 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.04□□□□□ -2.4
UPK1AO00322 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.04□□□□□ -2.4
UPK1AO00322 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
UPK1AO00322 Y_RNA.3-201ENST00000362331 103 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 U8.7-201ENST00000364940 136 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 Y_RNA.314-201ENST00000365114 102 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 Y_RNA.331-201ENST00000365267 102 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 Y_RNA.393-201ENST00000383936 102 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 SNORA75.6-201ENST00000391318 127 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 SNORD100-201ENST00000408573 76 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 AC236972.2-201ENST00000434979 310 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 Z83846.1-201ENST00000446798 265 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 RNU7-67P-201ENST00000459003 62 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 Y_RNA.635-201ENST00000459041 101 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 RNU6-437P-201ENST00000459408 95 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 RN7SL793P-201ENST00000583259 296 ntBASIC0.03□□□□□ -2.4
UPK1AO00322 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.02□□□□□ -2.41
UPK1AO00322 RNU4-67P-201ENST00000364569 141 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 RNA5SP117-201ENST00000365294 118 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 Y_RNA.570-201ENST00000384750 101 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 SNORD72-201ENST00000390994 80 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 RNU2-13P-201ENST00000515909 113 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 Y_RNA.673-201ENST00000516306 88 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 RNU7-30P-201ENST00000516835 62 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 AC090897.1-201ENST00000580909 226 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 MIR5690-201ENST00000583739 73 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 DEFB117-201ENST00000602356 141 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 AC002553.4-201ENST00000616896 331 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 U6.92-201ENST00000636464 89 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 TPTEP1-208ENST00000636884 213 ntBASIC0.02□□□□□ -2.41
UPK1AO00322 AC010332.2-201ENST00000613083 1904 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 Y_RNA.27-201ENST00000362540 103 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 RNU6-623P-201ENST00000363143 105 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 RNU6-1099P-201ENST00000363533 107 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 SNORD118-201ENST00000363593 134 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 Y_RNA.516-201ENST00000384541 124 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 SNORD38B-201ENST00000384690 67 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 MIR518F-201ENST00000384973 87 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 MIR1257-201ENST00000408490 117 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 MIR1278-201ENST00000408753 81 ntBASIC0.01□□□□□ -2.41
UPK1AO00322 RNU6-370P-201ENST00000411008 104 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms