Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
DDX39AO00148 Y_RNA.772-201ENST00000606692 102 ntBASIC0.6□□□□□ -2.31
DDX39AO00148 Pinc.1-201ENST00000616452 154 ntBASIC0.6□□□□□ -2.31
DDX39AO00148 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
DDX39AO00148 MIR1-1-201ENST00000362147 71 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 MTCO2P27-201ENST00000420740 428 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.59□□□□□ -2.31
DDX39AO00148 Y_RNA.632-201ENST00000459189 102 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AL355375.2-201ENST00000574825 175 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AC092447.9-201ENST00000603395 144 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AC122108.2-201ENST00000611946 526 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 AC104985.2-201ENST00000620598 500 ntBASIC0.59□□□□□ -2.31
DDX39AO00148 Y_RNA.36-201ENST00000362602 112 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 Y_RNA.70-201ENST00000362886 110 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 U8.7-201ENST00000364940 136 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 Y_RNA.458-201ENST00000384240 102 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 RNA5SP95-201ENST00000410319 137 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 SNORD19B-201ENST00000459623 84 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.58□□□□□ -2.32
DDX39AO00148 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.58□□□□□ -2.32
DDX39AO00148 RNU6-830P-201ENST00000516353 107 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 RNU7-115P-201ENST00000516433 55 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 RNU4-77P-201ENST00000516692 156 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 RNU7-110P-201ENST00000516891 62 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.58□□□□□ -2.32
DDX39AO00148 AC012433.1-201ENST00000588916 398 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AL121655.1-201ENST00000605811 308 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AC011373.1-201ENST00000607270 237 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 MIR548AY-201ENST00000617669 107 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
DDX39AO00148 Y_RNA.39-201ENST00000362620 98 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 SNORA72.1-201ENST00000363485 129 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 RNU6-1209P-201ENST00000363655 107 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 RNU6-396P-201ENST00000365369 105 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 SNORA51.10-201ENST00000384418 136 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 RNA5SP222-201ENST00000411039 105 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 AL160004.2-201ENST00000432935 350 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 FGF7P4-201ENST00000509595 295 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 Y_RNA.661-201ENST00000516003 99 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 MIR3145-201ENST00000580727 82 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 RPS29P30-201ENST00000600975 111 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
DDX39AO00148 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
DDX39AO00148 Y_RNA.168-201ENST00000363740 102 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 Y_RNA.252-201ENST00000364556 101 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 RNU1-115P-201ENST00000365329 160 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 RNU6-937P-201ENST00000384325 106 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 RNU4-30P-201ENST00000410245 143 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 MTND1P14-201ENST00000427400 950 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 SNRPGP14-201ENST00000435400 219 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 HMGN1P10-201ENST00000474557 553 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 NDUFA4P2-201ENST00000489989 244 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 AC082651.2-201ENST00000496833 166 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 SNORA40.14-201ENST00000516543 86 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 RNA5SP480-201ENST00000516840 109 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 MIR2681-201ENST00000581814 105 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 AC104695.3-201ENST00000604052 296 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 SNORD58B-201ENST00000607313 66 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 AL138825.1-201ENST00000618587 192 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 AL606534.2-204ENST00000635008 178 ntBASIC0.56□□□□□ -2.32
DDX39AO00148 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
DDX39AO00148 SNORA36.2-201ENST00000384004 127 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 SNORD63-201ENST00000384262 68 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 Y_RNA.551-201ENST00000384661 102 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 MIR570-201ENST00000384917 97 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 U8.17-201ENST00000391292 132 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 MTCO2P33-201ENST00000402100 465 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 AL080274.1-201ENST00000605565 220 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
DDX39AO00148 Y_RNA.5-201ENST00000362334 102 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.80-201ENST00000362996 102 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 SNORD114-26-201ENST00000363543 72 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 RNU6-268P-201ENST00000364174 107 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.242-201ENST00000364473 110 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.303-201ENST00000364998 94 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.439-201ENST00000384119 94 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.485-201ENST00000384395 102 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.537-201ENST00000384626 109 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 RNU6-21P-201ENST00000384710 107 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 AC010655.3-201ENST00000478818 450 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 RNU6-1007P-201ENST00000516586 107 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.54□□□□□ -2.32
DDX39AO00148 AC008507.4-201ENST00000585464 127 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 AC015726.2-201ENST00000620112 122 ntBASIC0.54□□□□□ -2.32
DDX39AO00148 Y_RNA.143-201ENST00000363520 106 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 Y_RNA.376-201ENST00000365638 108 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 Y_RNA.529-201ENST00000384586 119 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms