Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SNORD115-11-201ENST00000363616 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-5-201ENST00000363633 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-39-201ENST00000363694 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-4-201ENST00000363810 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-16-201ENST00000363887 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-6-201ENST00000363942 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-42-201ENST00000364273 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 RNU4-75P-201ENST00000364621 146 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-15-201ENST00000364809 81 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-1-201ENST00000364961 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-26-201ENST00000365067 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-10-201ENST00000365073 81 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-43-201ENST00000365503 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-36-201ENST00000365629 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AC074085.1-201ENST00000413598 418 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 U8.19-201ENST00000459095 133 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 U8.22-201ENST00000459141 133 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 RNU7-167P-201ENST00000459160 62 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AC116353.3-201ENST00000511215 249 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AP000676.1-201ENST00000533307 52 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 MIR3165-201ENST00000579874 75 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 MIR3941-201ENST00000582572 103 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-40-201ENST00000606510 82 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AL121757.2-201ENST00000611223 313 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AL512506.1-201ENST00000613918 449 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 AC104010.1-201ENST00000616889 150 ntBASIC-1.37□□□□□ -2.63
CPSF4LA6NMK7 MIR410-201ENST00000362222 80 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 SNORD115-2-201ENST00000362842 82 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 RNU6-454P-201ENST00000364292 107 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 AC105417.1-201ENST00000514691 285 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 DEFB131E-201ENST00000532329 154 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 AC080013.3-201ENST00000606839 578 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 AC145423.2-201ENST00000610631 239 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 uc_338.10-201ENST00000621872 182 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 AL391262.2-201ENST00000622466 494 ntBASIC-1.38□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 RNU6-325P-201ENST00000411132 105 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 USP9YP16-201ENST00000430287 407 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 MIR548AE1-201ENST00000583292 70 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 AC008507.4-201ENST00000585464 127 ntBASIC-1.39□□□□□ -2.63
CPSF4LA6NMK7 SNORD50.1-201ENST00000362987 71 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 RNU1-141P-201ENST00000364623 158 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 RNU6-169P-201ENST00000365336 107 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 SNORA72-201ENST00000384339 132 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 RPL30P15-201ENST00000457129 321 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 snoU13.11-201ENST00000459219 104 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 AC112204.1-201ENST00000502591 103 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 SNORD27.1-201ENST00000516319 72 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 CPDP1-201ENST00000579660 283 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 AL354950.2-201ENST00000617939 290 ntBASIC-1.4□□□□□ -2.63
CPSF4LA6NMK7 RNU4-28P-201ENST00000364739 141 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 RNU6-413P-201ENST00000384115 107 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AL603910.2-201ENST00000407268 136 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 RNU4-55P-201ENST00000410731 137 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 MTCO1P29-201ENST00000496868 288 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 RNU7-53P-201ENST00000516705 60 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AC141846.1-201ENST00000568348 142 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 MIR4703-201ENST00000577728 79 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AC138207.3-201ENST00000585289 166 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AL158050.2-201ENST00000605336 568 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AC004223.4-201ENST00000612426 332 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 AC027807.2-201ENST00000616099 408 ntBASIC-1.41□□□□□ -2.64
CPSF4LA6NMK7 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 RNU6-30P-201ENST00000384561 107 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 RNA5SP237-201ENST00000410414 113 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 AC026421.1-201ENST00000519101 163 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 MIR5704-201ENST00000584029 77 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 AC011603.4-201ENST00000611325 277 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 AL121895.2-201ENST00000619558 447 ntBASIC-1.42□□□□□ -2.64
CPSF4LA6NMK7 SNORD115-35-201ENST00000365122 82 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 RNU6-597P-201ENST00000365620 102 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 RNU6-949P-201ENST00000384040 107 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 SNORA49-201ENST00000386157 136 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 SNORD72-201ENST00000390994 80 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 MTND3P8-201ENST00000412909 339 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 RNU7-25P-201ENST00000516544 62 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 RNU6-531P-201ENST00000516694 104 ntBASIC-1.43□□□□□ -2.64
CPSF4LA6NMK7 AC104576.1-201ENST00000524225 88 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms