Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 Y_RNA.646-201ENST00000410980 101 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 RNU6-370P-201ENST00000411008 104 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 SNORA40.8-201ENST00000411034 126 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 RNU7-62P-201ENST00000458856 62 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 MTND4P17-201ENST00000470444 350 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 RNU7-115P-201ENST00000516433 55 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 RNU7-30P-201ENST00000516835 62 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 AC020891.4-201ENST00000605745 93 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 AC002553.4-201ENST00000616896 331 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 MIR548AY-201ENST00000617669 107 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 U2.1-201ENST00000618978 145 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 U6.92-201ENST00000636464 89 ntBASIC0.1□□□□□ -2.39
IGHV3-43A0A0B4J1X8 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 U8.7-201ENST00000364940 136 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1215P-201ENST00000384441 102 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-310P-201ENST00000384655 107 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD72-201ENST00000390994 80 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AF228730.4-201ENST00000421457 183 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC024067.1-201ENST00000426199 223 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-56P-201ENST00000458744 62 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.635-201ENST00000459041 101 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC091951.2-201ENST00000500762 203 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU2-13P-201ENST00000515909 113 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR2681-201ENST00000581814 105 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 DEFB117-201ENST00000602356 141 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC080013.6-201ENST00000606185 215 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC006441.5-201ENST00000612680 209 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 TPTEP1-208ENST00000636884 213 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR924-201ENST00000638017 53 ntBASIC0.09□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.314-201ENST00000365114 102 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.331-201ENST00000365267 102 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-890P-201ENST00000384121 107 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR938-201ENST00000401216 83 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR1278-201ENST00000408753 81 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.599-201ENST00000410489 109 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC090844.1-201ENST00000422019 156 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AL589823.1-201ENST00000429577 183 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA18.4-201ENST00000516440 124 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1007P-201ENST00000516586 107 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RPL23AP91-201ENST00000569211 455 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AL080274.1-201ENST00000605565 220 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA25.18-201ENST00000607153 114 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC098679.4-201ENST00000624241 654 ntBASIC0.08□□□□□ -2.4
IGHV3-43A0A0B4J1X8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.27-201ENST00000362540 103 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1188P-201ENST00000363795 107 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.242-201ENST00000364473 110 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-708P-201ENST00000384217 107 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AL603910.2-201ENST00000407268 136 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 snoU13.16-201ENST00000459350 104 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-437P-201ENST00000459408 95 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC069439.1-201ENST00000494739 167 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-911P-201ENST00000516523 104 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNA5SP94-201ENST00000516917 108 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 uc_338.16-201ENST00000621804 95 ntBASIC0.07□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR598-201ENST00000384868 97 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD100-201ENST00000408573 76 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC091959.1-201ENST00000495857 238 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR5690-201ENST00000583739 73 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 uc_338.6-201ENST00000613544 171 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC134878.1-201ENST00000619901 243 ntBASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC010332.2-201ENST00000613083 1904 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA63C-201ENST00000364578 129 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-364P-201ENST00000384387 107 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA36B-201ENST00000410438 131 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC096644.2-201ENST00000429278 159 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC236972.2-201ENST00000434979 310 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC107297.1-201ENST00000459991 176 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-358P-201ENST00000516564 75 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR3145-201ENST00000580727 82 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC090897.1-201ENST00000580909 226 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR4423-201ENST00000580922 80 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC008608.1-201ENST00000603910 127 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AL355297.3-201ENST00000604082 446 ntBASIC0.05□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD81.1-201ENST00000363064 77 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNY1-201ENST00000364228 113 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-102P-201ENST00000458948 62 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-67P-201ENST00000459003 62 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD11-201ENST00000459124 84 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-25P-201ENST00000516544 62 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 Y_RNA.691-201ENST00000516611 103 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC084782.3-201ENST00000612282 578 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR6740-201ENST00000618268 113 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC138305.3-201ENST00000624988 240 ntBASIC0.04□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORD118-201ENST00000363593 134 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms