Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.69□□□□□ -1.98
DDX41Q9UJV9 MIR378D2-201ENST00000580636 98 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 MIR4762-201ENST00000585261 75 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 MIR203B-201ENST00000636080 86 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DDX41Q9UJV9 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 SNORD14E-201ENST00000364009 85 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 RNU6-484P-201ENST00000384016 107 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.68□□□□□ -1.98
DDX41Q9UJV9 RNA5SP57-201ENST00000459463 123 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 AC055731.1-201ENST00000474387 401 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 RPL23AP63-201ENST00000498752 471 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
DDX41Q9UJV9 AC008507.4-201ENST00000585464 127 ntBASIC2.68□□□□□ -1.98
DDX41Q9UJV9 RNU6-774P-201ENST00000363238 107 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 SNORD37.2-201ENST00000391075 66 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 AL356320.1-201ENST00000429616 163 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.67□□□□□ -1.98
DDX41Q9UJV9 MRPS17P9-201ENST00000511924 393 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 SNORA31.10-201ENST00000516482 106 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 SNORD116-25-201ENST00000516517 92 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 MTND5P41-201ENST00000517498 206 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX41Q9UJV9 MIR4709-201ENST00000577272 72 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 MIR4524B-201ENST00000581569 115 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 MIR3133-201ENST00000583157 78 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.67□□□□□ -1.98
DDX41Q9UJV9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 RNU6-199P-201ENST00000362954 107 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 RNU7-34P-201ENST00000459394 64 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 MIR4648-201ENST00000580107 72 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 MIR4769-201ENST00000584126 77 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DDX41Q9UJV9 AC008555.8-201ENST00000623602 2168 ntBASIC2.66□□□□□ -1.98
DDX41Q9UJV9 RNU6-151P-201ENST00000364158 107 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.634-201ENST00000364811 113 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 RNU6-442P-201ENST00000383968 104 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 RNU6-296P-201ENST00000384608 107 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 AL158823.1-201ENST00000418441 478 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 HMGN2P32-201ENST00000444648 269 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 RNU6-504P-201ENST00000516568 104 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 IGKV3-31-201ENST00000523109 329 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 AC067747.1-201ENST00000608026 250 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX41Q9UJV9 AP000553.5-201ENST00000641933 54 ntBASIC2.65□□□□□ -1.99
DDX41Q9UJV9 MIR21-201ENST00000362134 72 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 RNU6-163P-201ENST00000384396 106 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 RNU6-125P-201ENST00000384505 107 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 HSPE1P9-201ENST00000440046 311 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 snoU13.27-201ENST00000459278 104 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 SNORD45.4-201ENST00000516629 73 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 RNA5SP437-201ENST00000517249 129 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 MIR3646-201ENST00000578301 84 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 MIR5007-201ENST00000583098 95 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 MIR6844-201ENST00000637122 62 ntBASIC2.64□□□□□ -1.99
DDX41Q9UJV9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX41Q9UJV9 SNORA25.7-201ENST00000364375 127 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 SNORA4.2-201ENST00000365313 147 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 RNA5SP212-201ENST00000391223 107 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 RNA5SP100-201ENST00000410903 110 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 RNA5SP59-201ENST00000410922 110 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 CYCTP-201ENST00000504253 315 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 MIR1273D-201ENST00000577266 86 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 MIR5694-201ENST00000581190 76 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 AC097639.2-201ENST00000603159 172 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.63□□□□□ -1.99
DDX41Q9UJV9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX41Q9UJV9 ZNF702P-202ENST00000434269 1966 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 SNORD50B-201ENST00000364995 70 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
DDX41Q9UJV9 SNORD72-201ENST00000390994 80 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 RNU4-61P-201ENST00000411243 107 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX41Q9UJV9 AL392103.1-201ENST00000447000 198 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 AC120024.3-201ENST00000603167 156 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 AC027279.3-201ENST00000625055 122 ntBASIC2.62□□□□□ -1.99
DDX41Q9UJV9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX41Q9UJV9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.61□□□□□ -1.99
DDX41Q9UJV9 RNU6-597P-201ENST00000365620 102 ntBASIC2.61□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.488-201ENST00000384403 102 ntBASIC2.61□□□□□ -1.99
DDX41Q9UJV9 MIR513C-201ENST00000401352 84 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms