Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 DEFB117-201ENST00000602356 141 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 AP003357.1-201ENST00000604497 148 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 JPX_2.1-201ENST00000614161 69 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 SNORD81.1-201ENST00000363064 77 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 RNA5SP48-201ENST00000363969 126 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 SNORD14E-201ENST00000364009 85 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.203-201ENST00000364106 102 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 RNU6-21P-201ENST00000384710 107 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 AL590004.1-201ENST00000405321 300 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 SNORD123-201ENST00000459473 70 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 RPL23AP54-201ENST00000495129 419 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 RNU7-41P-201ENST00000515917 61 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 RNU7-115P-201ENST00000516433 55 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 DEFB108E-201ENST00000524692 240 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 AC024405.2-202ENST00000532731 184 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CLCF1Q9UBD9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.5-201ENST00000362334 102 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 AF228730.4-201ENST00000421457 183 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 MTND1P14-201ENST00000427400 950 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 HMGN1P10-201ENST00000474557 553 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.702-201ENST00000516843 96 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 AC093027.1-201ENST00000546698 429 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 AC127455.1-201ENST00000565496 145 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 MIR2681-201ENST00000581814 105 ntBASIC0.66□□□□□ -2.3
CLCF1Q9UBD9 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 RNU4-50P-201ENST00000364361 141 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 RNU6-937P-201ENST00000384325 106 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 SNORD38C-201ENST00000384381 69 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR802-201ENST00000390235 94 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR548S-201ENST00000581352 82 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 SNORD58B-201ENST00000607313 66 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MIR548AY-201ENST00000617669 107 ntBASIC0.65□□□□□ -2.31
CLCF1Q9UBD9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.143-201ENST00000363520 106 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 U8.7-201ENST00000364940 136 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNY3-201ENST00000365484 102 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-442P-201ENST00000383968 104 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.471-201ENST00000384312 102 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-1248P-201ENST00000391096 64 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 MIR1185-1-201ENST00000408598 86 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-507P-201ENST00000516045 100 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-475P-201ENST00000516073 104 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-1007P-201ENST00000516586 107 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 RNU11-2P-201ENST00000516898 142 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 MIR4801-201ENST00000582704 82 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 AL080274.1-201ENST00000605565 220 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 AC006157.1-201ENST00000611750 366 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 MIR6515-201ENST00000619843 57 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 AC112487.2-201ENST00000637950 304 ntBASIC0.64□□□□□ -2.31
CLCF1Q9UBD9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.58-201ENST00000362807 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.80-201ENST00000362996 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.154-201ENST00000363624 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 RNU6-1209P-201ENST00000363655 107 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.197-201ENST00000364004 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 RNU1-133P-201ENST00000364867 167 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 RNY3P1-201ENST00000365085 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.485-201ENST00000384395 102 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 RNU4-30P-201ENST00000410245 143 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 POLR2KP2-201ENST00000438155 177 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 SEPT14P8-201ENST00000508026 178 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 MTND3P22-201ENST00000510932 243 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 RN7SKP164-201ENST00000516138 266 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 MIR3145-201ENST00000580727 82 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 AC131055.1-201ENST00000584626 316 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 SNORD113-5-201ENST00000607261 78 ntBASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CLCF1Q9UBD9 AL442644.1-201ENST00000454390 3105 ntBASIC0.62□□□□□ -2.31
CLCF1Q9UBD9 Y_RNA.148-201ENST00000363557 117 ntBASIC0.62□□□□□ -2.31
CLCF1Q9UBD9 RNY1-201ENST00000364228 113 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms