Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 RNU6-53P-201ENST00000365367 106 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 Y_RNA.355-201ENST00000365462 98 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 RNU6-937P-201ENST00000384325 106 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 Y_RNA.485-201ENST00000384395 102 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 Y_RNA.551-201ENST00000384661 102 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 RNU4-30P-201ENST00000410245 143 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 RPL23AP54-201ENST00000495129 419 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 AC024405.2-202ENST00000532731 184 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 AP003357.1-201ENST00000604497 148 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 AC006157.1-201ENST00000611750 366 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 JPX_2.1-201ENST00000614161 69 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 AC007742.2-201ENST00000618226 398 ntBASIC0.72□□□□□ -2.29
SMPD3Q9NY59 Y_RNA.143-201ENST00000363520 106 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.203-201ENST00000364106 102 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 RNU4-50P-201ENST00000364361 141 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.315-201ENST00000365117 102 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.330-201ENST00000365230 109 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 SNORD63-201ENST00000384262 68 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.471-201ENST00000384312 102 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 AC117454.1-201ENST00000491120 168 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 MTND3P22-201ENST00000510932 243 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 RNU7-41P-201ENST00000515917 61 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 RNU7-43P-201ENST00000516554 64 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 AC127455.1-201ENST00000565496 145 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 MIR4764-201ENST00000580680 88 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 MIR3145-201ENST00000580727 82 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 MIR548AY-201ENST00000617669 107 ntBASIC0.71□□□□□ -2.3
SMPD3Q9NY59 RNU4-73P-201ENST00000363164 141 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 SNORA25.3-201ENST00000363205 127 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 RNA5SP48-201ENST00000363969 126 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.197-201ENST00000364004 102 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 RNY1P14-201ENST00000384426 108 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 MIR802-201ENST00000390235 94 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.579-201ENST00000390939 94 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
SMPD3Q9NY59 SNORD123-201ENST00000459473 70 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 HMGN1P10-201ENST00000474557 553 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 RNU7-115P-201ENST00000516433 55 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 RNU6-113P-201ENST00000516653 101 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 AC040926.1-201ENST00000530195 238 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 MIR4795-201ENST00000584182 89 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 AC087685.1-201ENST00000587507 141 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.804-201ENST00000615262 101 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.7□□□□□ -2.3
SMPD3Q9NY59 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SMPD3Q9NY59 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.69□□□□□ -2.3
SMPD3Q9NY59 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 SNORD38C-201ENST00000384381 69 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 MT-TD-201ENST00000387419 68 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 POLR2KP2-201ENST00000438155 177 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 MIR4452-201ENST00000583004 71 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
SMPD3Q9NY59 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SMPD3Q9NY59 RNU6-1209P-201ENST00000363655 107 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.383-201ENST00000383855 97 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 RNU6-442P-201ENST00000383968 104 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 RNY3P14-201ENST00000384309 102 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 RNU6-475P-201ENST00000516073 104 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 AL080274.1-201ENST00000605565 220 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 SNORD113-5-201ENST00000607261 78 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.68□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.112-201ENST00000363250 102 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.67□□□□□ -2.3
SMPD3Q9NY59 SEPT14P8-201ENST00000508026 178 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 RNU6-1170P-201ENST00000515974 106 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SMPD3Q9NY59 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 MIR2681-201ENST00000581814 105 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 AC007485.1-201ENST00000616755 206 ntBASIC0.67□□□□□ -2.3
SMPD3Q9NY59 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMPD3Q9NY59 RNU4-80P-201ENST00000363200 141 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.148-201ENST00000363557 117 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 Y_RNA.424-201ENST00000384063 103 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RNU6-1248P-201ENST00000391096 64 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 MIR1302-11-201ENST00000408051 138 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 MIR1302-9-201ENST00000408365 138 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 MIR1302-10-201ENST00000408734 138 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RNU6-130P-201ENST00000411112 103 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RPS26P5-201ENST00000418544 335 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RNU7-141P-201ENST00000459304 62 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RNU6-437P-201ENST00000459408 95 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 AC131055.1-201ENST00000584626 316 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 AL133255.1-201ENST00000606374 441 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 MIR1302-2-201ENST00000607096 138 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms