Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 MIR2681-201ENST00000581814 105 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 LARP7P1-201ENST00000605576 316 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6-674P-201ENST00000363831 107 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.424-201ENST00000384063 103 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 SNORA72.4-201ENST00000384174 132 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 RNU7-141P-201ENST00000459304 62 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 RNA5SP458-201ENST00000516188 119 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 AC008133.2-201ENST00000624540 351 ntBASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
CCL28Q9NRJ3 AC134026.1-201ENST00000623249 2239 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 SNORA36B-201ENST00000410438 131 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC022028.1-201ENST00000412054 408 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 SNRPGP14-201ENST00000435400 219 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 MTND4P19-201ENST00000446659 478 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.639-201ENST00000458981 102 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC005840.1-201ENST00000498412 377 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 RNU6-830P-201ENST00000516353 107 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 RNU11-2P-201ENST00000516898 142 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC008507.4-201ENST00000585464 127 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC005357.1-201ENST00000588399 301 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 AC211469.2-201ENST00000605461 205 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 MIR4251-201ENST00000635819 61 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCL28Q9NRJ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 RNU6-801P-201ENST00000364087 105 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 SNORD42.2-201ENST00000365570 69 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 SNORA63.7-201ENST00000365579 123 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 RNU2-14P-201ENST00000411053 191 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 AC109810.1-201ENST00000534066 224 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 AC023827.1-201ENST00000569247 97 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 MIR3973-201ENST00000579824 107 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 MIR4300-201ENST00000581016 96 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 MIR4769-201ENST00000584126 77 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 Pinc.1-201ENST00000616452 154 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 MIR376A1-201ENST00000616574 68 ntBASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCL28Q9NRJ3 MIR369-201ENST00000362155 70 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 SNORD113-8-201ENST00000363497 74 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.418-201ENST00000384029 102 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.445-201ENST00000384168 102 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 SNORD28B-201ENST00000390993 75 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 SNORA26.5-201ENST00000391215 123 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AL392103.1-201ENST00000447000 198 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 RNU6-191P-201ENST00000516295 94 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 RPL23AP91-201ENST00000569211 455 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 MIR548AR-201ENST00000582191 57 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AC136443.5-201ENST00000603741 370 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AC104695.3-201ENST00000604052 296 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AC090971.5-201ENST00000621102 293 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 AC090574.1-201ENST00000623186 233 ntBASIC0.62□□□□□ -2.31
CCL28Q9NRJ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.136-201ENST00000363444 102 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 SNORD114-27-201ENST00000363766 70 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.183-201ENST00000363882 113 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 RNU6-102P-201ENST00000384485 104 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 MIR1278-201ENST00000408753 81 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 MTATP6P23-201ENST00000440153 476 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 SNORD11-201ENST00000459124 84 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 PSMC1P5-201ENST00000512850 177 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.715-201ENST00000517082 110 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 AC124312.5-201ENST00000604451 268 ntBASIC0.61□□□□□ -2.31
CCL28Q9NRJ3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms