Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-1137P-201ENST00000517073 99 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 AC136628.3-201ENST00000521868 290 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 MIR3192-201ENST00000584920 77 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 AL357312.1-201ENST00000603879 298 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 SNORA72.4-201ENST00000384174 132 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 RPL21P38-201ENST00000418090 167 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 AC108729.3-201ENST00000513484 108 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-764P-201ENST00000516396 105 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.701-201ENST00000516812 110 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 RNU4-90P-201ENST00000362773 141 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.158-201ENST00000363651 101 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-770P-201ENST00000363929 105 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 MIR136-201ENST00000385207 82 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AP1B1P2-201ENST00000416196 106 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 U8.19-201ENST00000459095 133 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 SNORA31.4-201ENST00000516049 129 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 RPL23AP91-201ENST00000569211 455 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AC113195.1-201ENST00000579952 141 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 MIR4680-201ENST00000580906 66 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AL356055.1-201ENST00000602528 446 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
VIPAS39Q9H9C1 AL391987.6-201ENST00000305671 199 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 SNORD14E-201ENST00000364009 85 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-763P-201ENST00000390865 106 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 MTCO1P5-201ENST00000433573 344 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-437P-201ENST00000459408 95 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 AC005357.1-201ENST00000588399 301 ntBASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.02□□□□□ -2.25
VIPAS39Q9H9C1 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 AC117470.1-201ENST00000381974 330 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 MIR802-201ENST00000390235 94 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 AL512605.2-201ENST00000592972 256 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 snoU13.31-201ENST00000607291 104 ntBASIC1.01□□□□□ -2.25
VIPAS39Q9H9C1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.202-201ENST00000364083 110 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.581-201ENST00000391017 97 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 HMGN2P32-201ENST00000444648 269 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1□□□□□ -2.25
VIPAS39Q9H9C1 MTND5P22-201ENST00000458380 195 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1□□□□□ -2.25
VIPAS39Q9H9C1 RNU7-41P-201ENST00000515917 61 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 SNORA74.3-201ENST00000517108 154 ntBASIC1□□□□□ -2.25
VIPAS39Q9H9C1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-662P-201ENST00000384253 104 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-383P-201ENST00000410864 94 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-899P-201ENST00000363947 107 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-290P-201ENST00000365212 101 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-969P-201ENST00000383900 105 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 SNORD72-201ENST00000390994 80 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 SNORA75.2-201ENST00000391138 150 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 SNORA75.3-201ENST00000391231 150 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AL603825.1-201ENST00000438481 80 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 SNORD123-201ENST00000459473 70 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 RPS26P48-201ENST00000491713 339 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AP003733.2-201ENST00000529409 171 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 MIR4764-201ENST00000580680 88 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms