Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU7-138P-201ENST00000459479 64 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 MTCO3P38-201ENST00000468910 766 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 SNORA25.10-201ENST00000515926 124 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 AC022616.4-201ENST00000522985 181 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 AL136370.1-201ENST00000608166 691 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 AL512427.1-201ENST00000618593 349 ntBASIC-1.51□□□□□ -2.65
SCAPERQ9BY12 RNU6-757P-201ENST00000410334 100 ntBASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 SCARNA18B-201ENST00000458806 135 ntBASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 AC080013.3-201ENST00000606839 578 ntBASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 AP002371.2-201ENST00000624450 503 ntBASIC-1.52□□□□□ -2.65
SCAPERQ9BY12 RNU6-403P-201ENST00000363163 104 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 SNORD115-32-201ENST00000364079 82 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RNU6-169P-201ENST00000365336 107 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RNU6-455P-201ENST00000384681 107 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RNU6-721P-201ENST00000410155 105 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RPS27AP14-201ENST00000422868 454 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 AL445193.1-201ENST00000441183 141 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RNU7-167P-201ENST00000459160 62 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 HSPE1P23-201ENST00000509838 286 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 SNORA25.13-201ENST00000516395 103 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 RNU6-706P-201ENST00000517229 104 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 MIR8055-201ENST00000610739 97 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 AL121895.2-201ENST00000619558 447 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 AC126544.2-201ENST00000625174 749 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 SEPT14P19-203ENST00000633205 211 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 U6.115-201ENST00000636045 103 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 Z97988.1-201ENST00000637697 135 ntBASIC-1.53□□□□□ -2.65
SCAPERQ9BY12 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 SNORA20.2-201ENST00000383922 131 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 RNU6-926P-201ENST00000384075 107 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 SNORA24-201ENST00000384096 131 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 RNU6-533P-201ENST00000384144 107 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 SNORD110-201ENST00000408189 75 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 AC105417.1-201ENST00000514691 285 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 AP003072.1-201ENST00000531740 145 ntBASIC-1.54□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 RNU6-442P-201ENST00000383968 104 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 SNORD116-12-201ENST00000384468 92 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 RNU6-541P-201ENST00000384709 110 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 RNU6-159P-201ENST00000391080 106 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 BX276092.1-201ENST00000427368 251 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 MTATP6P14-201ENST00000455189 673 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 SCOCP1-201ENST00000554676 349 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 AC005828.6-201ENST00000606610 232 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 AC072046.2-201ENST00000618366 268 ntBASIC-1.55□□□□□ -2.66
SCAPERQ9BY12 SNORD116.1-201ENST00000365628 92 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 RNU6-708P-201ENST00000384217 107 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 SNRPGP14-201ENST00000435400 219 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 AC016550.1-201ENST00000505348 785 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 AL133255.1-201ENST00000606374 441 ntBASIC-1.56□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 MT-TY-201ENST00000387409 66 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 GMFBP1-201ENST00000467831 427 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 MIR4280-201ENST00000582178 76 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AC011458.1-201ENST00000604034 617 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AC009248.2-201ENST00000619826 254 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AL596211.1-201ENST00000569873 2277 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 RNU6-268P-201ENST00000364174 107 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 MTATP6P18-201ENST00000417994 673 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AC006210.1-201ENST00000424882 111 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 RPL39P25-201ENST00000449384 154 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 SNORA13-201ENST00000458790 133 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 MTND5P34-201ENST00000568888 325 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 PIGPP4-201ENST00000584447 307 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AC005771.1-201ENST00000585581 349 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 AC064836.2-201ENST00000609491 462 ntBASIC-1.57□□□□□ -2.66
SCAPERQ9BY12 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 RNU7-67P-201ENST00000459003 62 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 UBL5P4-201ENST00000562584 236 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 AC090616.2-202ENST00000584248 222 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 RNU6-86P-201ENST00000606534 107 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 U2.17-201ENST00000611454 95 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.58□□□□□ -2.66
SCAPERQ9BY12 RNU6-602P-201ENST00000411155 105 ntBASIC-1.59□□□□□ -2.66
SCAPERQ9BY12 MTND3P1-201ENST00000441336 220 ntBASIC-1.59□□□□□ -2.66
SCAPERQ9BY12 SNORD38.3-201ENST00000516599 73 ntBASIC-1.59□□□□□ -2.66
SCAPERQ9BY12 RNU6-410P-201ENST00000517006 107 ntBASIC-1.59□□□□□ -2.66
SCAPERQ9BY12 MIR4703-201ENST00000577728 79 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms