Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-651P-201ENST00000411040 105 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 RNU6-1023P-201ENST00000516137 106 ntBASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.07□□□□□ -2.08
CHMP4CQ96CF2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.60-201ENST00000362831 98 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.65-201ENST00000362846 100 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 U8.5-201ENST00000364528 136 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RNU6-163P-201ENST00000384396 106 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 MIR660-201ENST00000385235 97 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 AC023449.1-201ENST00000454464 154 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RPL23AP91-201ENST00000569211 455 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 MIR4282-201ENST00000583613 67 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 AC120024.3-201ENST00000603167 156 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 AP000942.4-201ENST00000604811 241 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 AL442067.1-201ENST00000613261 223 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 MIR8063-201ENST00000621930 81 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
CHMP4CQ96CF2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.188-201ENST00000363952 111 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 RNA5SP363-201ENST00000365072 115 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 SNORA8.3-201ENST00000384679 139 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR194-1-201ENST00000384892 85 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR522-201ENST00000385071 87 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR513A1-201ENST00000385138 129 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR526A2-201ENST00000390198 65 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 RNU6-383P-201ENST00000410864 94 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MTND1P19-201ENST00000511780 315 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR4643-201ENST00000577473 78 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 SNORA77B-201ENST00000578179 125 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MIR4762-201ENST00000585261 75 ntBASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHMP4CQ96CF2 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.796-201ENST00000364268 102 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 RNA5SP259-201ENST00000365541 109 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 MIR1278-201ENST00000408753 81 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 HSPE1P24-201ENST00000450782 238 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 AC005908.1-201ENST00000468701 347 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 AC008834.1-201ENST00000511612 175 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 Y_RNA.680-201ENST00000516441 93 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 RNU6-1271P-201ENST00000517049 105 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
CHMP4CQ96CF2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 MIR802-201ENST00000390235 94 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 MIR891A-201ENST00000401237 79 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 PIGPP3-201ENST00000425307 415 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 RNU6-250P-201ENST00000516958 103 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 SUMO2P16-201ENST00000519475 264 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 MIR5688-201ENST00000580619 83 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 AC087685.1-201ENST00000587507 141 ntBASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHMP4CQ96CF2 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.76-201ENST00000362931 109 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.292-201ENST00000364904 97 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 RNU6-969P-201ENST00000383900 105 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 RNA5SP496-201ENST00000391240 109 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 SNORD116-28-201ENST00000516123 91 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 RNU4-71P-201ENST00000516258 113 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 AC100767.1-201ENST00000528178 123 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 AC027279.3-201ENST00000625055 122 ntBASIC2.02□□□□□ -2.09
CHMP4CQ96CF2 RNU4-10P-201ENST00000364383 140 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 AC114811.1-201ENST00000507207 168 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 AL365265.1-201ENST00000621045 234 ntBASIC2.01□□□□□ -2.09
CHMP4CQ96CF2 AC068700.1-201ENST00000565862 3754 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.24-201ENST00000362508 103 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.269-201ENST00000364685 89 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 RNU6-338P-201ENST00000383888 105 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 HMGN2P32-201ENST00000444648 269 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 SNORD45.4-201ENST00000516629 73 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 RNU6-111P-201ENST00000517179 105 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2□□□□□ -2.09
CHMP4CQ96CF2 AC015688.6-201ENST00000577737 104 ntBASIC2□□□□□ -2.09
CHMP4CQ96CF2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2□□□□□ -2.09
CHMP4CQ96CF2 RNU6-199P-201ENST00000362954 107 ntBASIC1.99□□□□□ -2.09
CHMP4CQ96CF2 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
CHMP4CQ96CF2 SNORD14E-201ENST00000364009 85 ntBASIC1.99□□□□□ -2.09
CHMP4CQ96CF2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms