Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-290P-201ENST00000365212 101 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 RNU6-131P-201ENST00000391144 107 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 SNRPGP10-201ENST00000432323 225 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 RNU7-141P-201ENST00000459304 62 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.673-201ENST00000516306 88 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC136628.3-201ENST00000521868 290 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AP003072.1-201ENST00000531740 145 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC090049.2-201ENST00000550377 109 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC127455.1-201ENST00000565496 145 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC60Q8IWA6 snoU2_19.2-201ENST00000363024 80 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 RNU6-833P-201ENST00000363486 107 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 RNU6-801P-201ENST00000364087 105 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 SNORA2.2-201ENST00000365473 135 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 SNORA72.4-201ENST00000384174 132 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 MTCO2P33-201ENST00000402100 465 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 RNU6-985P-201ENST00000410182 104 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 MTCO1P5-201ENST00000433573 344 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 U8.19-201ENST00000459095 133 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 MIR4762-201ENST00000585261 75 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 FAM106DP-201ENST00000586416 501 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 JPX_2.1-201ENST00000614161 69 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 AC022140.2-201ENST00000623500 188 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 AC027279.3-201ENST00000625055 122 ntBASIC1.2□□□□□ -2.22
CCDC60Q8IWA6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 SNORA25.1-201ENST00000362326 128 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.276-201ENST00000364732 109 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 RNU6-514P-201ENST00000384208 107 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.541-201ENST00000384640 113 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 MIR526A1-201ENST00000384897 85 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 SNORA26.5-201ENST00000391215 123 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 AC113618.1-201ENST00000416747 285 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 SNORD45.4-201ENST00000516629 73 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 AP003733.2-201ENST00000529409 171 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 AL512605.2-201ENST00000592972 256 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 AC136443.5-201ENST00000603741 370 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 AC037487.3-201ENST00000606668 112 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
CCDC60Q8IWA6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 MIR516B2-201ENST00000385190 85 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 SNORA53-201ENST00000391141 249 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 SNORA36B-201ENST00000410438 131 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 MTND5P22-201ENST00000458380 195 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 RNU6-1143P-201ENST00000516125 104 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 RNU2-31P-201ENST00000516954 155 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.16-201ENST00000362421 102 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 RNU6-763P-201ENST00000390865 106 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 MIR1278-201ENST00000408753 81 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 MIR1298-201ENST00000408783 112 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 RNU6-437P-201ENST00000459408 95 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 AC005357.1-201ENST00000588399 301 ntBASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC60Q8IWA6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 SNORD50B-201ENST00000364995 70 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 AL731563.1-201ENST00000442202 214 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 RNU6-570P-201ENST00000517051 105 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.16□□□□□ -2.22
CCDC60Q8IWA6 SNORA63-201ENST00000363450 132 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 RNU6-899P-201ENST00000363947 107 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 MIR802-201ENST00000390235 94 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 MTATP8P1-201ENST00000467115 207 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 AC091959.1-201ENST00000495857 238 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 SCARNA24.2-201ENST00000516968 130 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 RPL23AP91-201ENST00000569211 455 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 MIR4452-201ENST00000583004 71 ntBASIC1.15□□□□□ -2.23
CCDC60Q8IWA6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms