Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SNORD28B-201ENST00000390993 75 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 AL392103.1-201ENST00000447000 198 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.6□□□□□ -2.31
NIPAL3Q6P499 RNU6-277P-201ENST00000516272 106 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 RNU7-115P-201ENST00000516433 55 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 AC127455.1-201ENST00000565496 145 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 MIR548AY-201ENST00000617669 107 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 AL138825.1-201ENST00000618587 192 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 AC091925.1-201ENST00000623204 462 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 MIR6516-201ENST00000630554 81 ntBASIC0.6□□□□□ -2.31
NIPAL3Q6P499 Y_RNA.39-201ENST00000362620 98 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 RNU6-1209P-201ENST00000363655 107 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 RNU6-654P-201ENST00000364373 107 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 SNORA2B-201ENST00000384583 137 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 MTCO2P27-201ENST00000420740 428 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 MIR2681-201ENST00000581814 105 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 Pinc.1-201ENST00000616452 154 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 MIR6788-201ENST00000618842 66 ntBASIC0.59□□□□□ -2.31
NIPAL3Q6P499 Y_RNA.187-201ENST00000363918 113 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 U8.7-201ENST00000364940 136 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 RNU6-21P-201ENST00000384710 107 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NIPAL3Q6P499 MIR548J-201ENST00000408833 112 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AF228730.4-201ENST00000421457 183 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 MIR4300-201ENST00000581016 96 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AC012433.1-201ENST00000588916 398 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AL080274.1-201ENST00000605565 220 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 AL121655.1-201ENST00000605811 308 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.58□□□□□ -2.32
NIPAL3Q6P499 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
NIPAL3Q6P499 SNORD81.1-201ENST00000363064 77 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.796-201ENST00000364268 102 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.238-201ENST00000364441 102 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.799-201ENST00000364992 102 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.458-201ENST00000384240 102 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.57□□□□□ -2.32
NIPAL3Q6P499 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.57□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.661-201ENST00000516003 99 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 RNU6-830P-201ENST00000516353 107 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 RNU6-1007P-201ENST00000516586 107 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 MIR151B-201ENST00000584249 96 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 UBE2V2P2-201ENST00000587677 504 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 AC092447.9-201ENST00000603395 144 ntBASIC0.57□□□□□ -2.32
NIPAL3Q6P499 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.57□□□□□ -2.32
NIPAL3Q6P499 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
NIPAL3Q6P499 MIR570-201ENST00000384917 97 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 U8.17-201ENST00000391292 132 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 RNU6-613P-201ENST00000410412 108 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 AL160004.2-201ENST00000432935 350 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 HMGN1P10-201ENST00000474557 553 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 NDUFA4P2-201ENST00000489989 244 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 AL355375.2-201ENST00000574825 175 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 AC011195.1-201ENST00000578177 177 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 MIR3145-201ENST00000580727 82 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 AL132765.2-201ENST00000610812 351 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 AL442644.1-201ENST00000454390 3105 ntBASIC0.56□□□□□ -2.32
NIPAL3Q6P499 MIR1-1-201ENST00000362147 71 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU6-268P-201ENST00000364174 107 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.226-201ENST00000364337 114 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.242-201ENST00000364473 110 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU6-396P-201ENST00000365369 105 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.439-201ENST00000384119 94 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.551-201ENST00000384661 102 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 MIR1287-201ENST00000408492 90 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU4-30P-201ENST00000410245 143 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 SNRPGP14-201ENST00000435400 219 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU6-437P-201ENST00000459408 95 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.713-201ENST00000517013 96 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 AC008507.4-201ENST00000585464 127 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 AL078603.1-201ENST00000603824 313 ntBASIC0.55□□□□□ -2.32
NIPAL3Q6P499 RNU6-1115P-201ENST00000362490 106 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.526-201ENST00000384572 110 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 SNORD105-201ENST00000386910 85 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 MTCO2P33-201ENST00000402100 465 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 SNORA36B-201ENST00000410438 131 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 MTND1P14-201ENST00000427400 950 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.54□□□□□ -2.32
NIPAL3Q6P499 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.54□□□□□ -2.32
NIPAL3Q6P499 RBMX2P4-201ENST00000441256 376 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 RNU7-152P-201ENST00000458982 64 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.632-201ENST00000459189 102 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 U8.20-201ENST00000459445 131 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 SNORA40.14-201ENST00000516543 86 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms