Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6-819P-201ENST00000364116 107 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AC245505.1-201ENST00000556398 224 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AC027449.1-201ENST00000608890 407 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AP001282.2-201ENST00000616149 309 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 RNU6-527P-201ENST00000363425 104 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 RNU6-511P-201ENST00000363496 107 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 RNU6-727P-201ENST00000363592 107 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 MIR4756-201ENST00000577874 78 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 AC090616.2-202ENST00000584248 222 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 MIR20A-201ENST00000362279 71 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 SNORD14E-201ENST00000364009 85 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 SNORA75B-201ENST00000384053 137 ntBASIC-1.08□□□□□ -2.58
VPS13DQ5THJ4 MIR30D-201ENST00000362283 70 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 MTATP6P20-201ENST00000414147 562 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 MRPS10P1-201ENST00000448483 130 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC093899.1-201ENST00000457984 376 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC021451.1-201ENST00000523498 1129 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 MIR4762-201ENST00000585261 75 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AL133255.1-201ENST00000606374 441 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AL078596.1-201ENST00000624856 447 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 RNU6-384P-201ENST00000364900 104 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 MIR16-1-201ENST00000385271 89 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AL606845.1-201ENST00000404881 255 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC236972.2-201ENST00000434979 310 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 RNU6-677P-201ENST00000516914 101 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC138915.2-201ENST00000569776 97 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 AC139792.3-201ENST00000623525 224 ntBASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.1□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.1□□□□□ -2.58
VPS13DQ5THJ4 AC004866.1-201ENST00000411748 78 ntBASIC-1.1□□□□□ -2.58
VPS13DQ5THJ4 RPL30P10-201ENST00000488148 337 ntBASIC-1.1□□□□□ -2.58
VPS13DQ5THJ4 AC023158.2-201ENST00000614876 543 ntBASIC-1.1□□□□□ -2.58
VPS13DQ5THJ4 SNORD115-33-201ENST00000363723 82 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 SNORA49-201ENST00000386157 136 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 MIR320B2-201ENST00000408479 138 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AL450270.1-201ENST00000606160 391 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AL163152.1-201ENST00000642001 374 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 RNU6-97P-201ENST00000363387 104 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 SNORD115-16-201ENST00000363887 82 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 RNU6-131P-201ENST00000391144 107 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 EPS15P1-201ENST00000448836 336 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 RNU6-329P-201ENST00000459618 107 ntBASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.1□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 RNU6-865P-201ENST00000364772 107 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 USP9YP30-201ENST00000430729 455 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 RNU7-10P-201ENST00000607194 63 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 RNU6-77P-201ENST00000410554 91 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 TPTE2P5-203ENST00000458118 728 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 MTCO1P29-201ENST00000496868 288 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 AC091133.4-201ENST00000511142 308 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 MIR548H5-201ENST00000580314 60 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 AL445264.1-201ENST00000621719 171 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 RNU6-926P-201ENST00000384075 107 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 RNU6-466P-201ENST00000391224 103 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 SNRPGP7-201ENST00000469016 106 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 MTCO1P31-201ENST00000506355 492 ntBASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.11□□□□□ -2.59
VPS13DQ5THJ4 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 MTCYBP8-201ENST00000422855 651 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AL359672.1-201ENST00000442302 409 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 U8.22-201ENST00000459141 133 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 SNORA25.16-201ENST00000516741 121 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AC069113.1-201ENST00000517763 267 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 MTND5P40-201ENST00000559945 246 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 RNU6-245P-201ENST00000384020 107 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 SNORD77.3-201ENST00000391113 65 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 AL353813.1-201ENST00000440700 253 ntBASIC-1.12□□□□□ -2.59
VPS13DQ5THJ4 RNU6-966P-201ENST00000516479 104 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms