Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL358176.2-201ENST00000425769 204 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 BTF3P11-201ENST00000426582 477 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 RNU6-922P-201ENST00000516753 99 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 MIR5692C2-201ENST00000577959 77 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 MIR335-201ENST00000362173 94 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 Y_RNA.162-201ENST00000363683 102 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 Y_RNA.461-201ENST00000384263 103 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 AL603825.1-201ENST00000438481 80 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 AP000942.3-201ENST00000603702 160 ntBASIC1.61□□□□□ -2.15
CCDC38Q502W7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC38Q502W7 Y_RNA.149-201ENST00000363558 117 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 Y_RNA.275-201ENST00000364726 110 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 MIR526A1-201ENST00000384897 85 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 MIR1298-201ENST00000408783 112 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 MTND2P23-201ENST00000422990 651 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC38Q502W7 RNU6-1007P-201ENST00000516586 107 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC38Q502W7 AL161670.1-201ENST00000554348 137 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 RPL23AP91-201ENST00000569211 455 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 snoU18.1-201ENST00000629629 71 ntBASIC1.6□□□□□ -2.15
CCDC38Q502W7 Y_RNA.44-201ENST00000362676 108 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 Y_RNA.47-201ENST00000362697 108 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 SNORD41-201ENST00000386967 70 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 MIR1278-201ENST00000408753 81 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC38Q502W7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC38Q502W7 RN7SKP88-201ENST00000516847 250 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC38Q502W7 FAM106DP-201ENST00000586416 501 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 7SK.8-201ENST00000612110 250 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 7SK.11-201ENST00000615477 250 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 7SK.13-201ENST00000622040 250 ntBASIC1.59□□□□□ -2.15
CCDC38Q502W7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC38Q502W7 SNORD14E-201ENST00000364009 85 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 Y_RNA.483-201ENST00000384380 101 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 MT-TW-201ENST00000387382 68 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC38Q502W7 AC108729.3-201ENST00000513484 108 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 RNU6-1045P-201ENST00000516321 107 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 AL008718.3-201ENST00000610217 321 ntBASIC1.58□□□□□ -2.16
CCDC38Q502W7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC38Q502W7 RNU6-1309P-201ENST00000363305 108 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 Y_RNA.242-201ENST00000364473 110 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 RNU6-472P-201ENST00000384299 107 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 RNU6-1289P-201ENST00000384431 106 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 SNORD11-201ENST00000459124 84 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC38Q502W7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC38Q502W7 U2.14-201ENST00000615943 113 ntBASIC1.57□□□□□ -2.16
CCDC38Q502W7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC38Q502W7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
CCDC38Q502W7 MIR367-201ENST00000362299 68 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 MIR136-201ENST00000385207 82 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 RNA5SP496-201ENST00000391240 109 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 AC023449.1-201ENST00000454464 154 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 MTCO2P24-201ENST00000515611 426 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 RNU6-165P-201ENST00000517170 99 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 MIR4724-201ENST00000579485 89 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
CCDC38Q502W7 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 RNU6-442P-201ENST00000383968 104 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 RNU6-211P-201ENST00000384047 107 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 MIR15B-201ENST00000385045 98 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 MIR802-201ENST00000390235 94 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC38Q502W7 AC015922.2-201ENST00000435593 184 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC38Q502W7 AC090142.3-201ENST00000519012 385 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 MIR5688-201ENST00000580619 83 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 AC008507.4-201ENST00000585464 127 ntBASIC1.55□□□□□ -2.16
CCDC38Q502W7 MIR378A-201ENST00000362177 66 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 Y_RNA.133-201ENST00000363428 110 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 MIR526A2-201ENST00000390198 65 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 RNU6-383P-201ENST00000410864 94 ntBASIC1.54□□□□□ -2.16
CCDC38Q502W7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC38Q502W7 MTCYBP9-201ENST00000431021 303 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms