Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC131281.1-201ENST00000522984 164 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 MIR4306-201ENST00000583390 91 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 RNU6-502P-201ENST00000362419 108 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 RNU6-602P-201ENST00000411155 105 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 U8.19-201ENST00000459095 133 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 U8.22-201ENST00000459141 133 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.21□□□□□ -2.6
HMGXB3Q12766 MTND5P34-201ENST00000568888 325 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.21□□□□□ -2.6
HMGXB3Q12766 MIR6851-201ENST00000617060 67 ntBASIC-1.21□□□□□ -2.6
HMGXB3Q12766 RNU6-280P-201ENST00000364145 104 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNU6-784P-201ENST00000384330 106 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNY4P36-201ENST00000391116 96 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNU6-721P-201ENST00000410155 105 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AL500527.2-201ENST00000454105 95 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNU6-274P-201ENST00000459566 107 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AC116353.3-201ENST00000511215 249 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RPL39P5-202ENST00000512505 151 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNU2-69P-201ENST00000516061 100 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AC022616.4-201ENST00000522985 181 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 MIR4491-201ENST00000581087 68 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AC090616.2-202ENST00000584248 222 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AC005828.6-201ENST00000606610 232 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AL136370.1-201ENST00000608166 691 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 AL121757.2-201ENST00000611223 313 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 MIR7844-201ENST00000616161 122 ntBASIC-1.22□□□□□ -2.6
HMGXB3Q12766 RNU6-403P-201ENST00000363163 104 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 RNU6-266P-201ENST00000364225 107 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 MRPL42P2-201ENST00000403169 426 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AL008987.1-201ENST00000415528 237 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AC073464.1-201ENST00000429823 534 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AC091179.3-201ENST00000474761 144 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 RNA5SP470-201ENST00000516463 106 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 RNU6-706P-201ENST00000517229 104 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AC024405.2-202ENST00000532731 184 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AL133255.1-201ENST00000606374 441 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AL158209.2-201ENST00000619266 216 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 AC006386.1-201ENST00000619436 415 ntBASIC-1.23□□□□□ -2.61
HMGXB3Q12766 SNORD115-2-201ENST00000362842 82 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 RNU6-900P-201ENST00000384498 102 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 SNORD70.1-201ENST00000391007 85 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 AC006210.1-201ENST00000424882 111 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.24□□□□□ -2.61
HMGXB3Q12766 MTND3P9-201ENST00000429526 346 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 MTATP6P17-201ENST00000431030 672 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 AC108059.2-201ENST00000434626 151 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 AC010655.3-201ENST00000478818 450 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 HSPE1P23-201ENST00000509838 286 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
HMGXB3Q12766 RNU6-509P-201ENST00000363519 107 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 SNORD14E-201ENST00000364009 85 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNA5SP245-201ENST00000364239 121 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU6-442P-201ENST00000383968 104 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU6-413P-201ENST00000384115 107 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU6-708P-201ENST00000384217 107 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 MIR518B-201ENST00000385127 83 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU6-85P-201ENST00000605989 107 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 U6.115-201ENST00000636045 103 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU6-268P-201ENST00000364174 107 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNY1P12-201ENST00000364251 105 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 SNORD56B-201ENST00000384713 71 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.25□□□□□ -2.61
HMGXB3Q12766 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 SNORD38.3-201ENST00000516599 73 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 RNU7-188P-201ENST00000517063 64 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.25□□□□□ -2.61
HMGXB3Q12766 MIR4423-201ENST00000580922 80 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 AL391834.2-201ENST00000609982 546 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 uc_338.11-201ENST00000619132 160 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 uc_338.10-201ENST00000621872 182 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 AP002371.2-201ENST00000624450 503 ntBASIC-1.25□□□□□ -2.61
HMGXB3Q12766 MTND5P18-201ENST00000445624 1801 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 RNU6-865P-201ENST00000364772 107 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 MIR181B2-201ENST00000385004 89 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
HMGXB3Q12766 SCARNA18B-201ENST00000458806 135 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 RNU7-161P-201ENST00000517289 62 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.26□□□□□ -2.61
HMGXB3Q12766 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.26□□□□□ -2.61
HMGXB3Q12766 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 RNY4P28-201ENST00000365281 93 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 SNORD12C-201ENST00000386307 89 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 RNU6-757P-201ENST00000410334 100 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 RNA5SP261-201ENST00000410536 106 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 278.6 ms