Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.14-201ENST00000362415 103 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RNU6-1266P-201ENST00000362794 105 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.796-201ENST00000364268 102 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RNU6-740P-201ENST00000364734 105 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.799-201ENST00000364992 102 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.307-201ENST00000365022 117 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 SNORA4.2-201ENST00000365313 147 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RNU6-326P-201ENST00000365480 107 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.477-201ENST00000384352 108 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 Y_RNA.539-201ENST00000384635 107 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RPS20P10-201ENST00000451209 253 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RPS26P45-201ENST00000471748 340 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 AC091959.1-201ENST00000495857 238 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RNU7-99P-201ENST00000516271 62 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 RNU7-172P-201ENST00000517125 64 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 MIR3973-201ENST00000579824 107 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 MIR3128-201ENST00000581957 66 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 AC004832.4-201ENST00000608952 331 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 AC062037.2-201ENST00000610137 73 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RIPK4P57078 AC134026.1-201ENST00000623249 2239 ntBASIC1.23□□□□□ -2.21
RIPK4P57078 MIR335-201ENST00000362173 94 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 SNORD114-7-201ENST00000362520 77 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 RNU6-1187P-201ENST00000364771 110 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 U8.7-201ENST00000364940 136 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 Y_RNA.368-201ENST00000365547 113 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 Y_RNA.562-201ENST00000384695 113 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 MIR489-201ENST00000384923 84 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 RNU6-763P-201ENST00000390865 106 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 AL603910.2-201ENST00000407268 136 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 AC099513.1-201ENST00000490423 301 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 SNORA31.10-201ENST00000516482 106 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 SNORA27.4-201ENST00000516650 95 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.22□□□□□ -2.21
RIPK4P57078 AL137100.2-201ENST00000555786 315 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 MIR8063-201ENST00000621930 81 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 snoU18.1-201ENST00000629629 71 ntBASIC1.22□□□□□ -2.21
RIPK4P57078 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RIPK4P57078 Y_RNA.76-201ENST00000362931 109 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 Y_RNA.217-201ENST00000364214 105 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 Y_RNA.277-201ENST00000364754 102 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 Y_RNA.341-201ENST00000365341 102 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 Y_RNA.447-201ENST00000384184 113 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 MIR532-201ENST00000385025 91 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 RNU6-855P-201ENST00000410395 104 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AC010154.1-201ENST00000425857 269 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AL162725.1-201ENST00000435405 301 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 RPS4XP11-201ENST00000446897 772 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 HSPE1P13-201ENST00000451143 297 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK4P57078 Y_RNA.641-201ENST00000459414 105 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AC091021.1-201ENST00000468051 388 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 RNU1-142P-201ENST00000516682 145 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AC136628.3-201ENST00000521868 290 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 MIR4709-201ENST00000577272 72 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 MIR3684-201ENST00000579779 74 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.21□□□□□ -2.22
RIPK4P57078 AL008718.3-201ENST00000610217 321 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 AL359075.3-201ENST00000613288 217 ntBASIC1.21□□□□□ -2.22
RIPK4P57078 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RIPK4P57078 UBE2WP1-201ENST00000362030 340 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 Y_RNA.288-201ENST00000364854 92 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 RNU6-702P-201ENST00000364982 107 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 COX6CP10-201ENST00000416832 224 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 MTND4LP30-201ENST00000454092 297 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 RNU7-141P-201ENST00000459304 62 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC117454.1-201ENST00000491120 168 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.2□□□□□ -2.22
RIPK4P57078 RNU6-1291P-201ENST00000516591 104 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AL078603.1-201ENST00000603824 313 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC011921.3-201ENST00000605540 361 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
RIPK4P57078 AC018630.2-201ENST00000534866 2403 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.44-201ENST00000362676 108 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.60-201ENST00000362831 98 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.275-201ENST00000364726 110 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.456-201ENST00000384232 111 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 RNU6-1289P-201ENST00000384431 106 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 RNU6-950P-201ENST00000384651 107 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 Y_RNA.556-201ENST00000384677 113 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 MIR1302-3-201ENST00000408128 138 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 SUMO1P2-201ENST00000452524 304 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.19□□□□□ -2.22
RIPK4P57078 SNORA70.12-201ENST00000516084 153 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 AC005972.2-201ENST00000604690 348 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 MIR6079-201ENST00000635807 62 ntBASIC1.19□□□□□ -2.22
RIPK4P57078 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms