Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 Y_RNA.370-201ENST00000365589 108 ntBASIC0.81□□□□□ -2.28
LIM2P55344 Y_RNA.383-201ENST00000383855 97 ntBASIC0.81□□□□□ -2.28
LIM2P55344 Y_RNA.424-201ENST00000384063 103 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RNU6-937P-201ENST00000384325 106 ntBASIC0.81□□□□□ -2.28
LIM2P55344 Y_RNA.485-201ENST00000384395 102 ntBASIC0.81□□□□□ -2.28
LIM2P55344 AL590004.1-201ENST00000405321 300 ntBASIC0.81□□□□□ -2.28
LIM2P55344 MIR1287-201ENST00000408492 90 ntBASIC0.81□□□□□ -2.28
LIM2P55344 MTND1P14-201ENST00000427400 950 ntBASIC0.81□□□□□ -2.28
LIM2P55344 POLR2KP2-201ENST00000438155 177 ntBASIC0.81□□□□□ -2.28
LIM2P55344 MTND4P19-201ENST00000446659 478 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RPS26P48-201ENST00000491713 339 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
LIM2P55344 Y_RNA.721-201ENST00000517207 102 ntBASIC0.81□□□□□ -2.28
LIM2P55344 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.81□□□□□ -2.28
LIM2P55344 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
LIM2P55344 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RNA5SP264-201ENST00000363115 107 ntBASIC0.8□□□□□ -2.28
LIM2P55344 Y_RNA.136-201ENST00000363444 102 ntBASIC0.8□□□□□ -2.28
LIM2P55344 Y_RNA.143-201ENST00000363520 106 ntBASIC0.8□□□□□ -2.28
LIM2P55344 Y_RNA.183-201ENST00000363882 113 ntBASIC0.8□□□□□ -2.28
LIM2P55344 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
LIM2P55344 Y_RNA.445-201ENST00000384168 102 ntBASIC0.8□□□□□ -2.28
LIM2P55344 SNORD38C-201ENST00000384381 69 ntBASIC0.8□□□□□ -2.28
LIM2P55344 MIR520C-201ENST00000385005 87 ntBASIC0.8□□□□□ -2.28
LIM2P55344 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
LIM2P55344 MTND4LP11-201ENST00000422184 280 ntBASIC0.8□□□□□ -2.28
LIM2P55344 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
LIM2P55344 MTND4LP30-201ENST00000454092 297 ntBASIC0.8□□□□□ -2.28
LIM2P55344 RPL23AP54-201ENST00000495129 419 ntBASIC0.8□□□□□ -2.28
LIM2P55344 MIR3192-201ENST00000584920 77 ntBASIC0.8□□□□□ -2.28
LIM2P55344 AC136443.5-201ENST00000603741 370 ntBASIC0.8□□□□□ -2.28
LIM2P55344 AC104695.3-201ENST00000604052 296 ntBASIC0.8□□□□□ -2.28
LIM2P55344 AC090574.1-201ENST00000623186 233 ntBASIC0.8□□□□□ -2.28
LIM2P55344 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.8□□□□□ -2.28
LIM2P55344 U8.7-201ENST00000364940 136 ntBASIC0.79□□□□□ -2.28
LIM2P55344 RNU6-442P-201ENST00000383968 104 ntBASIC0.79□□□□□ -2.28
LIM2P55344 SNORA72.4-201ENST00000384174 132 ntBASIC0.79□□□□□ -2.28
LIM2P55344 Y_RNA.509-201ENST00000384506 99 ntBASIC0.79□□□□□ -2.28
LIM2P55344 RNU6-130P-201ENST00000411112 103 ntBASIC0.79□□□□□ -2.28
LIM2P55344 RNU6-437P-201ENST00000459408 95 ntBASIC0.79□□□□□ -2.28
LIM2P55344 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
LIM2P55344 MIR4764-201ENST00000580680 88 ntBASIC0.79□□□□□ -2.28
LIM2P55344 PART1_1.1-201ENST00000611761 217 ntBASIC0.79□□□□□ -2.28
LIM2P55344 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.79□□□□□ -2.28
LIM2P55344 AC007485.1-201ENST00000616755 206 ntBASIC0.79□□□□□ -2.28
LIM2P55344 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.78□□□□□ -2.28
LIM2P55344 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
LIM2P55344 Y_RNA.796-201ENST00000364268 102 ntBASIC0.78□□□□□ -2.28
LIM2P55344 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
LIM2P55344 Y_RNA.799-201ENST00000364992 102 ntBASIC0.78□□□□□ -2.28
LIM2P55344 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
LIM2P55344 MIR516B2-201ENST00000385190 85 ntBASIC0.78□□□□□ -2.28
LIM2P55344 SNORA75.2-201ENST00000391138 150 ntBASIC0.78□□□□□ -2.28
LIM2P55344 SNORA75.3-201ENST00000391231 150 ntBASIC0.78□□□□□ -2.28
LIM2P55344 RNU4-30P-201ENST00000410245 143 ntBASIC0.78□□□□□ -2.28
LIM2P55344 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
LIM2P55344 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
LIM2P55344 AC117454.1-201ENST00000491120 168 ntBASIC0.78□□□□□ -2.28
LIM2P55344 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.78□□□□□ -2.28
LIM2P55344 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
LIM2P55344 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
LIM2P55344 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
LIM2P55344 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
LIM2P55344 RNU6-1209P-201ENST00000363655 107 ntBASIC0.77□□□□□ -2.29
LIM2P55344 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
LIM2P55344 Y_RNA.380-201ENST00000365663 111 ntBASIC0.77□□□□□ -2.29
LIM2P55344 RNU6-144P-201ENST00000383951 107 ntBASIC0.77□□□□□ -2.29
LIM2P55344 SNORD115-46-201ENST00000390982 71 ntBASIC0.77□□□□□ -2.29
LIM2P55344 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.77□□□□□ -2.29
LIM2P55344 MIR1252-201ENST00000408861 65 ntBASIC0.77□□□□□ -2.29
LIM2P55344 SNORA36B-201ENST00000410438 131 ntBASIC0.77□□□□□ -2.29
LIM2P55344 FABP5P4-201ENST00000437203 171 ntBASIC0.77□□□□□ -2.29
LIM2P55344 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
LIM2P55344 Y_RNA.715-201ENST00000517082 110 ntBASIC0.77□□□□□ -2.29
LIM2P55344 MIR4300-201ENST00000581016 96 ntBASIC0.77□□□□□ -2.29
LIM2P55344 MIR4452-201ENST00000583004 71 ntBASIC0.77□□□□□ -2.29
LIM2P55344 AC008507.4-201ENST00000585464 127 ntBASIC0.77□□□□□ -2.29
LIM2P55344 AC124312.5-201ENST00000604451 268 ntBASIC0.77□□□□□ -2.29
LIM2P55344 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
LIM2P55344 MIR376A1-201ENST00000616574 68 ntBASIC0.77□□□□□ -2.29
LIM2P55344 SEPT14P17-201ENST00000617978 177 ntBASIC0.77□□□□□ -2.29
LIM2P55344 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.77□□□□□ -2.29
LIM2P55344 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LIM2P55344 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
LIM2P55344 Y_RNA.28-201ENST00000362554 111 ntBASIC0.76□□□□□ -2.29
LIM2P55344 RNU4-90P-201ENST00000362773 141 ntBASIC0.76□□□□□ -2.29
LIM2P55344 RNU6-899P-201ENST00000363947 107 ntBASIC0.76□□□□□ -2.29
LIM2P55344 Y_RNA.276-201ENST00000364732 109 ntBASIC0.76□□□□□ -2.29
LIM2P55344 Y_RNA.460-201ENST00000384255 102 ntBASIC0.76□□□□□ -2.29
LIM2P55344 MIR802-201ENST00000390235 94 ntBASIC0.76□□□□□ -2.29
LIM2P55344 SNRPGP14-201ENST00000435400 219 ntBASIC0.76□□□□□ -2.29
LIM2P55344 RNU7-141P-201ENST00000459304 62 ntBASIC0.76□□□□□ -2.29
LIM2P55344 AC010655.3-201ENST00000478818 450 ntBASIC0.76□□□□□ -2.29
LIM2P55344 RNU6-191P-201ENST00000516295 94 ntBASIC0.76□□□□□ -2.29
LIM2P55344 SNORA18.7-201ENST00000516910 131 ntBASIC0.76□□□□□ -2.29
LIM2P55344 AL160413.1-201ENST00000622780 310 ntBASIC0.76□□□□□ -2.29
LIM2P55344 MIR103A2-201ENST00000362154 78 ntBASIC0.75□□□□□ -2.29
LIM2P55344 RNU4-80P-201ENST00000363200 141 ntBASIC0.75□□□□□ -2.29
LIM2P55344 RNU6-1067P-201ENST00000384752 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms