Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR3937-201ENST00000580135 106 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 AC005357.1-201ENST00000588399 301 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NR1H2P55055 SNORD68-201ENST00000363214 84 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.203-201ENST00000364106 102 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.253-201ENST00000364562 112 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.293-201ENST00000364908 93 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.416-201ENST00000384014 113 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.590-201ENST00000410140 107 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 MTND1P19-201ENST00000511780 315 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 Y_RNA.679-201ENST00000516416 91 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.66□□□□□ -2.14
NR1H2P55055 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.66□□□□□ -2.14
NR1H2P55055 MIR4643-201ENST00000577473 78 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 MIR3128-201ENST00000581957 66 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 AL591926.4-201ENST00000616895 298 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 SNORD3E-202ENST00000627253 216 ntBASIC1.66□□□□□ -2.14
NR1H2P55055 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.14
NR1H2P55055 AC068700.1-201ENST00000565862 3754 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 SNORD27-201ENST00000363981 72 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 Y_RNA.307-201ENST00000365022 117 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 MIR660-201ENST00000385235 97 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 MLLT10P1-201ENST00000418346 262 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 CALM2P4-201ENST00000430810 426 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
NR1H2P55055 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
NR1H2P55055 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NR1H2P55055 Y_RNA.82-201ENST00000363000 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.92-201ENST00000363043 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.122-201ENST00000363331 96 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 RNU6-457P-201ENST00000363999 107 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.226-201ENST00000364337 114 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.235-201ENST00000364412 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.306-201ENST00000365015 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.312-201ENST00000365089 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.322-201ENST00000365151 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 RNU6-144P-201ENST00000383951 107 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.447-201ENST00000384184 113 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 MIR1278-201ENST00000408753 81 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.650-201ENST00000459002 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 HMGN1P7-201ENST00000491722 313 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.64□□□□□ -2.15
NR1H2P55055 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.680-201ENST00000516441 93 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 RNA5SP168-201ENST00000516642 112 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.777-201ENST00000516982 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.771-201ENST00000598668 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 Y_RNA.789-201ENST00000622480 102 ntBASIC1.64□□□□□ -2.15
NR1H2P55055 RNU6-674P-201ENST00000363831 107 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 U8.16-201ENST00000391279 133 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 SNRPGP10-201ENST00000432323 225 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 SNORD2.1-201ENST00000458762 69 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 BX284668.6-201ENST00000606899 438 ntBASIC1.63□□□□□ -2.15
NR1H2P55055 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NR1H2P55055 MIR378A-201ENST00000362177 66 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 Y_RNA.60-201ENST00000362831 98 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 Y_RNA.65-201ENST00000362846 100 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 RNU4-10P-201ENST00000364383 140 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 RNU6-424P-201ENST00000384367 105 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 RNU6-383P-201ENST00000410864 94 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.62□□□□□ -2.15
NR1H2P55055 RNU6-1116P-201ENST00000517269 99 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 MIR4282-201ENST00000583613 67 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 JPX_2.1-201ENST00000614161 69 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 MIR7111-201ENST00000619751 72 ntBASIC1.62□□□□□ -2.15
NR1H2P55055 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
NR1H2P55055 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
NR1H2P55055 MIRLET7C-201ENST00000362160 84 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.76-201ENST00000362931 109 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 RNU6-1209P-201ENST00000363655 107 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.796-201ENST00000364268 102 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 SNORA20.1-201ENST00000364790 130 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.799-201ENST00000364992 102 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.401-201ENST00000383965 117 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.478-201ENST00000384358 107 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 Y_RNA.539-201ENST00000384635 107 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 MIR522-201ENST00000385071 87 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 MIR1287-201ENST00000408492 90 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.61□□□□□ -2.15
NR1H2P55055 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 RPL23AP91-201ENST00000569211 455 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 MIR4724-201ENST00000579485 89 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 MIR2681-201ENST00000581814 105 ntBASIC1.61□□□□□ -2.15
NR1H2P55055 MIR367-201ENST00000362299 68 ntBASIC1.6□□□□□ -2.15
NR1H2P55055 Y_RNA.20-201ENST00000362479 113 ntBASIC1.6□□□□□ -2.15
NR1H2P55055 RNU6-131P-201ENST00000391144 107 ntBASIC1.6□□□□□ -2.15
NR1H2P55055 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
NR1H2P55055 BTF3P4-201ENST00000418852 495 ntBASIC1.6□□□□□ -2.15
NR1H2P55055 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.6□□□□□ -2.15
NR1H2P55055 RNU6-1023P-201ENST00000516137 106 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms