Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNA5SP496-201ENST00000391240 109 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN9P43378 CYCTP-201ENST00000504253 315 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 Y_RNA.673-201ENST00000516306 88 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 AC100767.1-201ENST00000528178 123 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN9P43378 AC015712.3-201ENST00000559380 164 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 MIR4724-201ENST00000579485 89 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 JPX_2.1-201ENST00000614161 69 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 Y_RNA.802-201ENST00000614892 130 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 MIR126-201ENST00000362291 85 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 MIR367-201ENST00000362299 68 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 SNORD27-201ENST00000363981 72 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 Y_RNA.242-201ENST00000364473 110 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 RNU6-651P-201ENST00000411040 105 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 SNRPGP10-201ENST00000432323 225 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.67□□□□□ -2.14
PTPN9P43378 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
PTPN9P43378 RNU6-1007P-201ENST00000516586 107 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.67□□□□□ -2.14
PTPN9P43378 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.67□□□□□ -2.14
PTPN9P43378 MIR4524B-201ENST00000581569 115 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 AC011921.3-201ENST00000605540 361 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 AL021707.8-201ENST00000609428 183 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
PTPN9P43378 Y_RNA.76-201ENST00000362931 109 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 RNU6-1209P-201ENST00000363655 107 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 Y_RNA.292-201ENST00000364904 97 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 Y_RNA.293-201ENST00000364908 93 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 Y_RNA.477-201ENST00000384352 108 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.66□□□□□ -2.14
PTPN9P43378 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 SNORD11-201ENST00000459124 84 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 RNU6-1271P-201ENST00000517049 105 ntBASIC1.66□□□□□ -2.14
PTPN9P43378 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PTPN9P43378 AC068700.1-201ENST00000565862 3754 ntBASIC1.65□□□□□ -2.14
PTPN9P43378 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.14
PTPN9P43378 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
PTPN9P43378 SNORD68-201ENST00000363214 84 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 RNU6-833P-201ENST00000363486 107 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 RNY4P28-201ENST00000365281 93 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 RNU6-131P-201ENST00000391144 107 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 U8.16-201ENST00000391279 133 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 CALM2P4-201ENST00000430810 426 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
PTPN9P43378 AC015688.6-201ENST00000577737 104 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 AC006006.1-201ENST00000603082 144 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
PTPN9P43378 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.15
PTPN9P43378 Y_RNA.262-201ENST00000364641 102 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 Y_RNA.269-201ENST00000364685 89 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 MIR1278-201ENST00000408753 81 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 HMGN2P32-201ENST00000444648 269 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 AC023449.1-201ENST00000454464 154 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 snoU13.9-201ENST00000458927 103 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 RNU6-111P-201ENST00000517179 105 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 AL365265.1-201ENST00000621045 234 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.64□□□□□ -2.15
PTPN9P43378 AC095038.3-201ENST00000634439 195 ntBASIC1.64□□□□□ -2.15
PTPN9P43378 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 RNU6-653P-201ENST00000363074 106 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 Y_RNA.476-201ENST00000384347 108 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 SNORD116-28-201ENST00000516123 91 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 RPL23AP91-201ENST00000569211 455 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 AC141273.2-201ENST00000618989 130 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 SNORD3E-202ENST00000627253 216 ntBASIC1.63□□□□□ -2.15
PTPN9P43378 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PTPN9P43378 SNORD33-201ENST00000362761 85 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 Y_RNA.65-201ENST00000362846 100 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 RNU6-379P-201ENST00000363813 104 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 snoU2-30.1-201ENST00000365012 70 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 Y_RNA.336-201ENST00000365307 109 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 MIR891A-201ENST00000401237 79 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 AC009779.6-201ENST00000603972 165 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 AL353997.5-201ENST00000618886 171 ntBASIC1.62□□□□□ -2.15
PTPN9P43378 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
PTPN9P43378 ICE2P2-201ENST00000483823 2787 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
PTPN9P43378 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PTPN9P43378 RNY3P5-201ENST00000384127 102 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 RNU6-163P-201ENST00000384396 106 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 MIR513A1-201ENST00000385138 129 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 RNU6-383P-201ENST00000410864 94 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.61□□□□□ -2.15
PTPN9P43378 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 NDUFA4P2-201ENST00000489989 244 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
PTPN9P43378 RNU6-126P-201ENST00000516685 103 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms